Information on SUBCLASS 5.2.5 |
Subclass Accession number: 1373
Subclass: 5.2.5 Type: EH beta-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.4 (>50 %) 1.4.3 (>50 %) 1.4.3.16 GO : GO:0003723 (>75 %) GO:0015036 (>50 %) SCOP : 56424 (>75 %) 56425 (>75 %) 56426 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 9.0 +/- 11.2 Average RMSD (Å) : 0.750 +/- 0.191 Consensus geometry
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Consensus Sequence: | XXhXphpXp |
(φψ)-conformation: | bbaaappaa |
Pattern: | x | [KLV] | x | x | [PRS] | [AEQR] | [ILVY] | [EPS] | x | [AER] | x | [ALT] | x |
Conservation: | -1.000 | 0.235 | -1.325 | -0.386 | 0.123 | 0.593 | 1.416 | 0.961 | -0.259 | 1.043 | -1.325 | 0.525 | -1.600 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1jj7_A_567 | 1jj7 | A | 567 | 578 | .KPLPQYEHRYLH | .EEGGGB-HHHHH | .bxaaaxxaaaaa |
1jv1_A_298 | 1jv1 | A | 301 | 313 | VVEYSEISLATAQ | EE-GGGS-HHHHH | bxxaaaxxaaaaa |
1kl9_A_81 | 1kl9 | A | 83 | 95 | DLSKRRVSPEEAI | EEESTT--HHHHH | bbbaaaxxaaaaa |
1lni_A_5 | 1lni | A | 5 | 17 | TVCLSALPPEATD | EEEGGGS-HHHHH | bbxaaaxpaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1jv1_A_298 | 1jv1 | A | UD1URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE | V - 301 |
1jv1_A_298 | 1jv1 | A | UD1URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE | E - 303 |
1jv1_A_298 | 1jv1 | A | UD1URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE | Y - 304 |
1kl9_A_81 | 1kl9 | A | MSESELENOMETHIONINE | I - 82 |
1kl9_A_81 | 1kl9 | A | MSESELENOMETHIONINE | D - 83 |
1kl9_A_81 | 1kl9 | A | MSESELENOMETHIONINE | L - 84 |
1kl9_A_81 | 1kl9 | A | MSESELENOMETHIONINE | S - 85 |
1kl9_A_81 | 1kl9 | A | MSESELENOMETHIONINE | A - 94 |
1kl9_A_81 | 1kl9 | A | MSESELENOMETHIONINE | C - 97 |
1kl9_A_81 | 1kl9 | A | MSESELENOMETHIONINE | E - 98 |
1kl9_A_81 | 1kl9 | A | MSESELENOMETHIONINE | F - 101 |
1kl9_A_81 | 1kl9 | A | ZNZINC ION | H - 113 |
1kl9_A_81 | 1kl9 | A | ZNZINC ION | E - 116 |
1lni_A_5 | 1lni | A | GOLGLYCEROL | T - 5 |
1lni_A_5 | 1lni | A | GOLGLYCEROL | V - 6 |
1lni_A_5 | 1lni | A | GOLGLYCEROL | C - 7 |
Clusters included in this Subclass |
CLUSTER: EH.4.296 |
CLUSTER: EH.5.286 |