ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 5.2.6

Subclass Accession number: 1374
Subclass: 5.2.6

Type: EH beta-alpha
DB: ArchDB40

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 4.4 (>50 %)  4.4.1 (>50 %)  4.4.1.14
GO : GO:0016846 (>50 %)  GO:0016847 (>50 %)
SCOP : 53382 (>50 %)  53383 (>50 %)  53417 (>50 %)

Number of loops: 3

Average sequence ID (%) : 6.7 +/- 9.5
Average RMSD (Å) : 0.800 +/- 0.200

Consensus geometry

d (Å): 13

delta (°): 45-90

theta (°): 90-135

rho (°): 135-180

Consensus Sequence:	XXhXphXpX
(φψ)-conformation:	bpaaappaa

Pattern:	x	[FHK]	[PRS]	[ALP]	[NPT]	[EQS]	[IVY]	x	[DHK]	x	[VWY]	x	[EHQ]	[AR]	x
Conservation:	-1.000	-0.666	-0.856	-1.423	-0.099	1.036	0.847	-0.125	0.090	-1.234	1.036	-1.234	1.792	0.802	0.034

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1jj7_A_567	1jj7	A	567	580	.KPLPQYEHRYLHRQ	.EEGGGB-HHHHHHH	.bxaaaxxaaaaaaa
1jvw_A_112	1jvw	A	113	127	TFRPNEVIKGWTEAL	EE-GGGS-HHHHHHH	xbxaaabxaaaaaaa
1kvk_A_378	1kvk	A	379	393	MHSATSIEDPVRQAL	EE-TTTS-HHHHHHH	bbxaaaxpaaaaaaa

Clusters included in this Subclass

CLUSTER: EH.5.285