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Information on SUBCLASS 5.3.1
Subclass Accession number: 1375
Subclass: 5.3.1 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0008270 (>75 %)  GO:0046914 (>75 %)  
Number of loops: 24

Average sequence ID (%) : 11.6 +/- 13.0
Average RMSD (Å) : 1.071 +/- 0.239

Consensus geometry
d (Å): 15 delta (°): 45-90 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: XXXXXhpXp
(φψ)-conformation: bbabpppaa
Pattern: [acfgilvy]xxxxxx[acfgilmpv][adenpst]x[adekst]x[afgiklmv][adegkqrst][aeknqrs]
Conservation:-0.192-1.3510.058-0.259-0.5000.052-0.094-0.9191.651-0.8981.816-0.547-0.646-0.0201.848
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a8d_*_2201a8d   -226240FRIFCKALNPKEIEKEEEESS---HHHHHHxbbbabxxxaaaaaa
1b65_A_2511b65   A254268VLATDLPLMPHQLKREEEE-S---HHHHHHbbbbaxxbxaaaaaa
1cl1_A_3101cl1   A312326SFVLKKKLNNEELANEEEESS---HHHHHHbbbxabxxxaaaaaa
1dv8_A_1631dv8   A165179YWFSRSGKAWADADNEEE-SS-B-HHHHHHbbbxabbbxaaaaaa
1e87_A_951e87   A97111YFISTVKRSWTSAQNEEE-SS-B-HHHHHHbbbxabbbxaaaaaa
1epu_A_961epu   A100114HIFFTEACPEELFKEEEEESS---HHHHHHbbbxabpxpaaaaaa
1g1t_A_21g1t   A317YNTSTEAMTYDEASAEEE-SS-B-HHHHHHbbbxaxxbxaaaaaa
1gdh_A_1721gdh   A174188DYFDTHRASSSDEASEEE-SS---HHHHHHbbbbabxxpaaaaaa
1h4v_B_3571h4v   B357371AEYALAPRKPAKGLEEEE-SS---HHHHHHbbbxabwbxaaaaaa
1ixh_*_521ixh   -5266FGASDAPLSDEKLAQEEEESS---HHHHHHbbbbaxxxxaaaaaa
1j3v_A_841j3v   A8599YWVDATSGEPEASRREEEE-S---HHHHHHbbbxaxxbxaaaaaa
1jx4_A_2951jx4   A299313GRTFPHGISKETAYSEEE-SS---HHHHHHbbbbabxbxaaaaaa
1knv_A_2351knv   A237251YGASSEPVSKADDDAEEEESS---HHHHHHbbbbabxbxaaaaaa
1kwg_A_5641kwg   A564578YLYLAAWPSPELAGREEEE-B---HHHHHHbbbxabxxxaaaaaa
1l0w_A_3191l0w   A322336ALALPKALSRKEVAEEEEESS---HHHHHHbbbxabxxxaaaaaa
1nij_A_2241nij   A228242VVELDYPVDISEVSREEEESS-B-HHHHHHbbbbabxbxaaaaaa
1no5_A_471no5   A5064AIISEEPLDFLARDREEE-SS---HHHHHHxxxbabpppaaaaaa
1nw1_A_1071nw1   A110124LRVYFNPETESHLVAEEEE-S---HHHHHHxbbbaxxxbaaaaaa
1qlm_A_1351qlm   A138152CLESSELPDEDVAEHEEE-SS---HHHHHHbbxbabxxxaaaaaa
1s0a_A_3651s0a   A367381VVETTHPVNMAALQKEEEESS-B-HHHHHHbbxbabxxxaaaaaa
1s4n_A_1561s4n   A157171VFLNDEPFTEEFKEAEEEESS---HHHHHHbbbbabxxxaaaaaa
1s7j_A_191s7j   A2337VYVLEKWLPEAVMQNEEE-SS---HHHHHHbbxxabxxxaaaaaa
1sh0_A_3441sh0   A346360IVSTDIKLDPEKLTAEEEESS---HHHHHHbbbbaxxbxaaaaaa
2nac_A_2162nac   A218232HYTDRHRLPESVEKEEEE-SS---HHHHHHbbbbabxxwaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dv8_A_1631dv8   A     CACALCIUM ION S - 163
1dv8_A_1631dv8   A     CACALCIUM ION Y - 165
1e87_A_951e87   A     GOLGLYCEROL R - 104
1e87_A_951e87   A     GOLGLYCEROL S - 105
1e87_A_951e87   A     GOLGLYCEROL W - 106
1e87_A_951e87   A     GOLGLYCEROL T - 107
1e87_A_951e87   A     GOLGLYCEROL S - 108
1e87_A_951e87   A     GOLGLYCEROL N - 111
1e87_A_951e87   A     ZNZINC ION E - 115
1epu_A_961epu   A     MSESELENOMETHIONINE T - 104
1epu_A_961epu   A     MSESELENOMETHIONINE L - 111
1epu_A_961epu   A     MSESELENOMETHIONINE E - 114
1epu_A_961epu   A     MSESELENOMETHIONINE L - 115
1epu_A_961epu   A     MSESELENOMETHIONINE C - 116
1ixh_*_521ixh   *     PO4PHOSPHATE ION A - 54
1ixh_*_521ixh   *     PO4PHOSPHATE ION S - 55
1ixh_*_521ixh   *     PO4PHOSPHATE ION D - 56
1ixh_*_521ixh   *     PO4PHOSPHATE ION A - 57
1j3v_A_841j3v   A     MSESELENOMETHIONINE A - 89
1j3v_A_841j3v   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE A - 89
1j3v_A_841j3v   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE T - 90
1j3v_A_841j3v   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE S - 91
1kwg_A_5641kwg   A     ACTACETATE ION L - 565
1kwg_A_5641kwg   A     ACTACETATE ION W - 570
1kwg_A_5641kwg   A     ACTACETATE ION P - 571
1kwg_A_5641kwg   A     ACTACETATE ION S - 572
1kwg_A_5641kwg   A     MPD2-METHYL-2,4-PENTANEDIOL S - 572
1kwg_A_5641kwg   A     ACTACETATE ION P - 573
1kwg_A_5641kwg   A     MPD2-METHYL-2,4-PENTANEDIOL P - 573
1kwg_A_5641kwg   A     MPD2-METHYL-2,4-PENTANEDIOL E - 574
1kwg_A_5641kwg   A     MPD2-METHYL-2,4-PENTANEDIOL A - 576
1kwg_A_5641kwg   A     MPD2-METHYL-2,4-PENTANEDIOL G - 577
1kwg_A_5641kwg   A     MPD2-METHYL-2,4-PENTANEDIOL R - 578
1kwg_A_5641kwg   A     ACTACETATE ION L - 579
1kwg_A_5641kwg   A     ACTACETATE ION A - 582
1kwg_A_5641kwg   A     ACTACETATE ION L - 583
1kwg_A_5641kwg   A     ACTACETATE ION E - 586
1no5_A_471no5   A     ZNZINC ION L - 47
1no5_A_471no5   A     ZNZINC ION D - 48
1qlm_A_1351qlm   A     PO4PHOSPHATE ION E - 140
1qlm_A_1351qlm   A     PO4PHOSPHATE ION H - 152
1qlm_A_1351qlm   A     PO4PHOSPHATE ION E - 156

Clusters included in this Subclass
CLUSTER: EH.4.157
CLUSTER: EH.4.98
CLUSTER: EH.5.27
CLUSTER: EH.5.38
CLUSTER: EH.6.15
CLUSTER: EH.6.223
CLUSTER: EH.6.61
CLUSTER: EH.7.16