Information on SUBCLASS 7.1.1 |
Subclass Accession number: 138
Subclass: 7.1.1 Type: HE alpha-beta DB: ArchDB-KI |
Number of loops: 6 Average sequence ID (%) : 49.7 +/- 4.2 Average RMSD (Å) : 1.01 +/- 0.45 Consensus geometry
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Consensus Sequence: | XXpXXCpNGFh |
(φψ)-conformation: | aapaaaaaebb |
Pattern: | [D] | x | [LMV] | [TV] | x | {AGM} | [IL] | x | [DEKR] | [EK] | x | [ILT] | {ENS} | [KNQT] | {DP} | x | [C] | [KQR] | [N] | [G] | [F] | [IL] | [L] | {D} |
Conservation: | 1.407 | -0.715 | -0.157 | -0.218 | -0.934 | -1.224 | 0.066 | -0.757 | -0.580 | 0.178 | -0.966 | -0.579 | -0.799 | -0.742 | -0.360 | -0.805 | 2.749 | -0.088 | 1.407 | 1.407 | 1.407 | 0.108 | 0.513 | -0.320 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ak2_*_77 | 1ak2 | - | 77 | 100 | DEMVLELIEKNLETPPCKNGFLLD | HHHHHHHHHHHHTSGGGTT-EEEE | aaaaaaaaaaaaaxaaaaaebbxb |
1ake_A_61 | 1ake | A | 61 | 84 | DELVIALVKERIAQEDCRNGFLLD | HHHHHHHHHHHHHSGGGGG-EEEE | aaaaaaaaaaaaaxaaaaaebbxb |
1aky_*_65 | 1aky | - | 66 | 89 | DIMVNMIKDELTNNPACKNGFILD | HHHHHHHHHHHHH-GGGGS-EEEE | aaaaaaaaaaaaaxaaaaaebbxb |
1dvr_A_66 | 1dvr | A | 66 | 89 | DIMVNMIKDELTNNPACKNGFILV | HHHHHHHHHHHHH-GGGGT-EEEE | aaaaaaaaaaaaabaaaaaebbxb |
1zip_*_61 | 1zip | - | 61 | 84 | DEVTIGIVRERLSKDDCQNGFLLD | HHHHHHHHHHHHTSGGGTT-EEEE | aaaaaaaaaaaaaxaaaaaebbxb |
2eck_A_61 | 2eck | A | 61 | 84 | DELVIALVKERIAQEDCRNGFLLD | HHHHHHHHHHHHTSGGGGS--EEE | aaaaaaaaaaaaapaaaaaebbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ake_A_61 | 1ake | A | AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE | D - 61 |
1ake_A_61 | 1ake | A | AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE | V - 64 |
1ake_A_61 | 1ake | A | AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE | D - 84 |
1aky_*_65 | 1aky | * | AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE | D - 65 |
1aky_*_65 | 1aky | * | AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE | M - 68 |
1aky_*_65 | 1aky | * | AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE | D - 89 |
1aky_*_65 | 1aky | * | IMDIMIDAZOLE | D - 89 |
1dvr_A_66 | 1dvr | A | ATFPHOSPHODIFLUOROMETHYLPHOSPHONIC ACID-ADENYLATE ESTER | V - 89 |
1zip_*_61 | 1zip | * | AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE | D - 61 |
1zip_*_61 | 1zip | * | AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE | T - 64 |
1zip_*_61 | 1zip | * | AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE | D - 84 |
1zip_*_61 | 1zip | * | MNMANGANESE (II) ION | D - 84 |
2eck_A_61 | 2eck | A | AMPADENOSINE MONOPHOSPHATE | D - 61 |
2eck_A_61 | 2eck | A | AMPADENOSINE MONOPHOSPHATE | V - 64 |
2eck_A_61 | 2eck | A | AMPADENOSINE MONOPHOSPHATE | D - 84 |
2eck_A_61 | 2eck | A | ADPADENOSINE-5'-DIPHOSPHATE | D - 84 |
Bibliographic annotations |
Clusters included in this Subclass |
CLUSTER: HE.8.1 |
CLUSTER: HE.8.5 |