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Information on SUBCLASS 5.9.1
Subclass Accession number: 1391
Subclass: 5.9.1 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.2 (>75 %)  1.2.1 (>75 %)  1.2.1.12
GO : GO:0005515 (>75 %)  GO:0008943 (>75 %)  GO:0016620 (>50 %)  GO:0016903 (>50 %)  
SCOP : 55346 (>75 %)  55347 (>75 %)  55348 (>75 %)  
 Number of loops: 8

Average sequence ID (%) : 7.4 +/- 9.6
Average RMSD (Å) : 0.725 +/- 0.320

Consensus geometry
d (Å): 13 delta (°): 0-45 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XXXXXXXhX
(φψ)-conformation: bbaplppaa
Pattern: xx[CDGNST][ciltv]xxx[DKPST]x[adgst][dekqt][AILMV]x
Conservation:-1.000-0.3690.6210.070-1.481-0.548-0.9501.311-1.0380.3571.0041.656-0.634
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b5t_A_851b5t   A88100HLTCIDATPDELREE-STT--HHHHHxbbaplbxaaaaa
1by2_*_261by2   -2941TVCDNLWDLTDASEEB-TT--HHHHHbbxaxvxbaaaaa
1itu_A_1931itu   A193205LIDLAHVSVATMKEEE-TTB-HHHHHxxbaxvxxaaaaa
1ji0_A_671ji0   A6778.QDITNKPAHVIN.EE-TT--HHHHH.bxapvxxaaaaa
1n7e_A_7251n7e   A725736.SSLKGKPLSEAI.EE-TT--HHHHH.xxapvbxaaaaa
1obz_A_1641obz   A164175.ENCAGWSSDKAH.EE-TT--HHHHH.xxapvxxaaaaa
1r6j_A_2441r6j   A244255.QNVIGLKDSQIA.EE-TT--HHHHH.xxapvxxaaaaa
1us0_A_171us0   A1728.LGTWKSPPGQVT.EE-TT--HHHHH.xxaxvxxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1b5t_A_851b5t   A     FADFLAVIN-ADENINE DINUCLEOTIDE H - 88
1b5t_A_851b5t   A     FADFLAVIN-ADENINE DINUCLEOTIDE L - 89
1b5t_A_851b5t   A     HGMERCURY (II) ION T - 90
1b5t_A_851b5t   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 90
1b5t_A_851b5t   A     HGMERCURY (II) ION C - 91
1b5t_A_851b5t   A     HGMERCURY (II) ION I - 92
1b5t_A_851b5t   A     FADFLAVIN-ADENINE DINUCLEOTIDE I - 92
1by2_*_261by2   *     NAGN-ACETYL-D-GLUCOSAMINE L - 37
1by2_*_261by2   *     NAGN-ACETYL-D-GLUCOSAMINE S - 41
1by2_*_261by2   *     NAGN-ACETYL-D-GLUCOSAMINE R - 45
1itu_A_1931itu   A     ZNZINC ION A - 197
1itu_A_1931itu   A     ZNZINC ION H - 198
1itu_A_1931itu   A     CILCILASTATIN H - 198
1ji0_A_671ji0   A     MSESELENOMETHIONINE Q - 67
1ji0_A_671ji0   A     MSESELENOMETHIONINE D - 68
1ji0_A_671ji0   A     MSESELENOMETHIONINE I - 69
1ji0_A_671ji0   A     MSESELENOMETHIONINE K - 72
1ji0_A_671ji0   A     MSESELENOMETHIONINE H - 75
1ji0_A_671ji0   A     MSESELENOMETHIONINE V - 76
1ji0_A_671ji0   A     MSESELENOMETHIONINE I - 77
1ji0_A_671ji0   A     MSESELENOMETHIONINE N - 78
1obz_A_1641obz   A     ACTACETATE ION H - 175
1obz_A_1641obz   A     ACTACETATE ION L - 178
1us0_A_171us0   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE L - 17
1us0_A_171us0   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 18
1us0_A_171us0   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE T - 19
1us0_A_171us0   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE W - 20
1us0_A_171us0   A     LDTIDD594 W - 20
1us0_A_171us0   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE K - 21
1us0_A_171us0   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE S - 22
1us0_A_171us0   A     CITCITRIC ACID P - 24
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1us0_A_171us0   A NDPNDP BINDING SITE FOR CHAIN AG - 18
1us0_A_171us0   A NDPNDP BINDING SITE FOR CHAIN AT - 19
1us0_A_171us0   A LDTLDT BINDING SITE FOR CHAIN AW - 20
1us0_A_171us0   A NDPNDP BINDING SITE FOR CHAIN AK - 21

Clusters included in this Subclass
CLUSTER: EH.4.191
CLUSTER: EH.5.63