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Information on SUBCLASS 6.23.1
Subclass Accession number: 1488
Subclass: 6.23.1 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : - (>75 %)  4.99 (>75 %)  4.99.1 (>75 %)  4.99.1.1
GO : GO:0004325 (>75 %)  GO:0004364 (>75 %)  GO:0004497 (>75 %)  GO:0004517 (>75 %)  GO:0005515 (>75 %)  GO:0016705 (>75 %)  GO:0016709 (>75 %)  GO:0016765 (>75 %)  
SCOP : 52832 (>75 %)  52833 (>75 %)  52862 (>75 %)  53799 (>75 %)  53800 (>75 %)  53801 (>75 %)  56511 (>75 %)  56512 (>75 %)  56513 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 15.7 +/- 15.5
Average RMSD (Å) : 0.875 +/- 0.435

Consensus geometry
d (Å): 15 delta (°): 0-45 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: hcXpchppXX
(φψ)-conformation: bpaaapabaa
Pattern: [HNQR]x[FI][DN]x[NRS][DK][ACVY][RST][NST][AKTV][EGQ][DES][MTV]x[ADTV][AY][AIL]
Conservation:0.302-1.1191.0462.074-1.7850.2590.801-0.7100.0040.717-0.8360.1880.8770.271-1.595-1.0260.3960.136
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1m7v_A_721m7v   A7289NVIDRRDVRTKEDVRDALEEEE-TT--SHHHHHHHHxxbxaaaxabaaaaaaaa
1pt6_A_1901pt6   A192209HEFNLNKYSSTEEVLVAAEEE-TTT-SSHHHHHHHHxabxaaababaaaaaaaa
1q2o_A_1961q2o   A196213QVFDARDCSSAQEMFTYIEEEE-TT--SHHHHHHHHxxxxaaaxabaaaaaaaa
2uag_A_3122uag   A313330RWINDSKATNVGSTEAALEEEE-TT--SHHHHHHHHbbbxaaaxabaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
2uag_A_3122uag   A     ADPADENOSINE-5'-DIPHOSPHATE D - 317
2uag_A_3122uag   A     ADPADENOSINE-5'-DIPHOSPHATE S - 318
2uag_A_3122uag   A     ADPADENOSINE-5'-DIPHOSPHATE K - 319
2uag_A_3122uag   A     ADPADENOSINE-5'-DIPHOSPHATE A - 320
2uag_A_3122uag   A     MGMAGNESIUM ION T - 321
2uag_A_3122uag   A     UMAURIDINE-5'-DIPHOSPHATE-N-ACETYLMURAMOYL-L-ALANINE T - 321
2uag_A_3122uag   A     ADPADENOSINE-5'-DIPHOSPHATE T - 321
2uag_A_3122uag   A     MGMAGNESIUM ION N - 322
2uag_A_3122uag   A     ADPADENOSINE-5'-DIPHOSPHATE G - 324
2uag_A_3122uag   A     ADPADENOSINE-5'-DIPHOSPHATE S - 325
2uag_A_3122uag   A     ADPADENOSINE-5'-DIPHOSPHATE T - 326
2uag_A_3122uag   A     ADPADENOSINE-5'-DIPHOSPHATE A - 328

Clusters included in this Subclass
CLUSTER: EH.6.99