Information on SUBCLASS 1.2.1 |
Subclass Accession number: 155
Subclass: 1.2.1 Type: HH alpha-alpha DB: ArchDB-KI |
Number of loops: 3 Average sequence ID (%) : 36.1 +/- 1.4 Average RMSD (Å) : 0.48 +/- 0.21 Consensus geometry
|
Consensus Sequence: | pXpPF |
(φψ)-conformation: | aapaa |
Pattern: | [EQ] | x | x | [AL] | [AEK] | x | x | [Y] | x | x | x | [KR] | x | [KR] | [P] | [F] | [FY] | x | x | [L] | [IV] | [KQR] | [FY] | [M] |
Conservation: | 0.265 | -0.798 | -1.133 | -0.717 | -0.854 | -0.854 | 0.171 | 1.988 | -1.356 | -0.832 | -0.881 | 0.278 | -1.244 | 0.278 | 1.988 | 1.486 | 0.851 | -0.091 | -0.966 | 0.483 | 0.248 | -0.241 | 0.948 | 0.985 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ehw_B_45 | 1ehw | B | 45 | 68 | ESVLAEHYQDLRRKPFYPALIRYM | HHHHHHHTGGGTTSTTHHHHHHHH | aaaaaaaaaaaaabxvaaaaaaaa |
1nhk_R_44 | 1nhk | R | 44 | 67 | QAQAEGFYAVHKARPFFKDLVQFM | HHHHHHHTGGGTTSTTHHHHHHHH | aaaaaaaaaaaaaxaaaaaaaaaa |
1nue_A_45 | 1nue | A | 45 | 68 | EEHLKQHYIDLKDRPFFPGLVKYM | HHHHHHHTGGGTTSTTHHHHHHHH | aaaaaaaaaaaaaxaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1nhk_R_44 | 1nhk | R | CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE | Y - 51 |
1nhk_R_44 | 1nhk | R | CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE | H - 54 |
1nhk_R_44 | 1nhk | R | CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE | F - 59 |
1nhk_R_44 | 1nhk | R | CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE | L - 63 |
1nhk_R_44 | 1nhk | R | CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE | M - 67 |
1nue_A_45 | 1nue | A | GDPGUANOSINE-5'-DIPHOSPHATE | Y - 52 |
1nue_A_45 | 1nue | A | MGMAGNESIUM ION | Y - 52 |
1nue_A_45 | 1nue | A | GDPGUANOSINE-5'-DIPHOSPHATE | D - 54 |
1nue_A_45 | 1nue | A | MGMAGNESIUM ION | D - 54 |
1nue_A_45 | 1nue | A | GDPGUANOSINE-5'-DIPHOSPHATE | L - 55 |
1nue_A_45 | 1nue | A | MGMAGNESIUM ION | L - 55 |
1nue_A_45 | 1nue | A | GDPGUANOSINE-5'-DIPHOSPHATE | R - 58 |
1nue_A_45 | 1nue | A | GDPGUANOSINE-5'-DIPHOSPHATE | F - 60 |
1nue_A_45 | 1nue | A | GDPGUANOSINE-5'-DIPHOSPHATE | L - 64 |
1nue_A_45 | 1nue | A | GDPGUANOSINE-5'-DIPHOSPHATE | Y - 67 |
Bibliographic annotations |
Clusters included in this Subclass |
CLUSTER: HH.8.2 |