ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 8.13.1

Subclass Accession number: 1554
Subclass: 8.13.1

Type: EH beta-alpha
DB: ArchDB40

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 1.11 (>75 %)  1.11.1 (>75 %)  1.11.1.6 2.7.7 (>75 %)  4.2 (>75 %)  4.2.1 (>75 %)  4.2.1.11 (>75 %)
GO : GO:0000287 (>75 %)  GO:0004096 (>75 %)  GO:0004601 (>75 %)  GO:0004634 (>75 %)  GO:0016684 (>75 %)  GO:0016772 (>75 %)  GO:0016779 (>75 %)  GO:0016829 (>75 %)  GO:0016835 (>75 %)  GO:0016836 (>75 %)
SCOP : 51604 (>75 %)  51605 (>75 %)  53447 (>75 %)  53448 (>75 %)  56633 (>75 %)  56634 (>75 %)  56635 (>75 %)  68901 (>75 %)

Number of loops: 3

Average sequence ID (%) : 33.3 +/- 15.9
Average RMSD (Å) : 0.400 +/- 0.173

Consensus geometry

d (Å): 25

delta (°): 45-90

theta (°): 45-90

rho (°): 0-45

Consensus Sequence:	XXXXGXXpLXXc
(φψ)-conformation:	bpaaebbbppaa

Pattern:	[AKV]	[HT]	[FWY]	[V]	[KR]	[FY]	[H]	[FW]	[IK]	[PS]	x	[AQ]	[G]	[IKV]	x	[NS]	[L]	[DSV]	x	[DK]	[E]	[AV]	[AQT]	[KQ]	[ILV]	[AQT]	[GS]	[EKR]
Conservation:	-1.109	0.029	0.622	0.622	0.405	1.019	2.772	1.515	-0.916	-0.410	-0.806	-0.426	1.697	-0.990	-0.990	0.288	0.622	-1.288	-1.288	-0.128	1.160	-0.379	-0.930	0.159	-0.094	-0.930	0.049	-0.273

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1gwe_A_214	1gwe	A	214	241	KHWVKYHFISQQGVHNLSNDEATKIAGE	EEEEEEEEEETT---B--HHHHHHHHHH	bbxbbbbbxxaaebbbbxaaaaaaaaaa
1m7s_A_231	1m7s	A	231	258	VHYVKFHWKSLQGIKNLDPKEVAQVQSK	EEEEEEEEEETT---B--HHHHHHHHHH	bbxbbbbxxxaaebbbxxaaaaaaaaaa
1p80_A_286	1p80	A	286	313	ATFVRFHWKPLAGKASLVWDEAQKLTGR	EEEEEEEEEETT---B--HHHHHHHHHH	bbxbbxbbbxaaexbbxbaaaaaaaaaa

Clusters included in this Subclass