ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 11.3.1

Subclass Accession number: 1579
Subclass: 11.3.1

Type: EH beta-alpha
DB: ArchDB40

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 1.1 (>75 %)  1.1 (>75 %)  1.1.1 (>75 %)  1.1.1 (>75 %)  1.1.1.27 (>75 %)  1.1.1.27 3.4 (>75 %)  3.4.17 (>75 %)
GO : GO:0004180 (>75 %)  GO:0004457 (>75 %)  GO:0004457 (>75 %)  GO:0004459 (>75 %)  GO:0004459 (>75 %)  GO:0008233 (>75 %)  GO:0008235 (>75 %)  GO:0008237 (>75 %)  GO:0008238 (>75 %)  GO:0016614 (>75 %)  GO:0016614 (>75 %)  GO:0016616 (>75 %)  GO:0016616 (>75 %)
SCOP : 51734 (>75 %)  51734 (>75 %)  51735 (>75 %)  51735 (>75 %)  51848 (>75 %)  51848 (>75 %)  54861 (>50 %)  54897 (>50 %)  54898 (>50 %)

Number of loops: 3

Average sequence ID (%) : 67.5 +/- -19.3
Average RMSD (Å) : 0.133 +/- 0.058

Consensus geometry

d (Å): 13

delta (°): 45-90

theta (°): 135-180

rho (°): 315-360

Consensus Sequence:	ELRDTGRYGFLLPXp
(φψ)-conformation:	bppwagaaeaappaa

Pattern:	[Y]	[S]	[F]	[AT]	[F]	[E]	[L]	[R]	[D]	[T]	[G]	[R]	[Y]	[G]	[F]	[L]	[L]	[P]	[AE]	[RS]	[Q]	[I]	x	[AP]	[T]	[AC]	[EQ]	[E]	[T]	[FW]	[L]	[AG]	[ILV]	[KL]	x	[IV]	[AM]	[ES]	[HY]	[TV]	x
Conservation:	1.654	-0.008	1.100	-0.895	1.100	0.546	-0.008	0.546	1.100	0.546	1.100	0.546	1.654	1.100	1.100	-0.008	-0.008	1.654	-1.266	-1.257	0.546	-0.008	-1.792	-0.874	0.546	-0.545	-0.263	0.546	0.546	0.570	-0.008	-0.768	-0.746	-1.441	-1.731	-0.282	-1.210	-0.936	0.452	-0.989	-1.915

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1aye_*_265	1aye	-	265	305	YSFAFELRDTGRYGFLLPARQILPTAEETWLGLKAIMEHVR	EEEEEEES-SSSSTTS--GGGHHHHHHHHHHHHHHHHHHHH	xbbbbbxpwaNaaeaaxwaaaaaaaaaaaaaaaaaaaaaaa
1kwm_A_265	1kwm	A	265	305	YSFTFELRDTGRYGFLLPESQIRATCEETFLAIKYVASYVL	EEEEEEES-SSSSGGG--GGGHHHHHHHHHHHHHHHHHHHH	bbbbbbxxwagaaeaapxaaaaaaaaaaaaaaaaaaaaaaa
1m4l_A_265	1m4l	A	265	305	YSFTFELRDTGRYGFLLPASQIIPTAQETWLGVLTIMEHTV	EEEEEEES-SSSSTTS--GGGHHHHHHHHHHHHHHHHHHHH	xbbbxbxpwagaaeaaxpaaaaaaaaaaaaaaaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1m4l_A_265	1m4l	A	ZNZINC ION	E - 270

PDB Site Annotated loops in this subclass

Loop	PDB	Chain	Site	Residue
1aye_*_265	1aye	*	1SUBSITE S1: ARG 145, ASN 144, TYR 248 SUBSITE S1: ARG 127, GLU 270 SUBSITE S2: ARG 71, SER 197, TYR 198, SER 199 SUBSITE S3: PHE 279 SUBSITE S4: LYS 122, ARG 124, LYS 128.	E - 270
1aye_*_265	1aye	*	1SUBSITE S1: ARG 145, ASN 144, TYR 248 SUBSITE S1: ARG 127, GLU 270 SUBSITE S2: ARG 71, SER 197, TYR 198, SER 199 SUBSITE S3: PHE 279 SUBSITE S4: LYS 122, ARG 124, LYS 128.	F - 279

Clusters included in this Subclass