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Information on SUBCLASS 1.1.2
Subclass Accession number: 1593
Subclass: 1.1.2 PSSM
Type: AR beta-beta link
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 42

Average sequence ID (%) : 8.6 +/- 12.5
Average RMSD (Å) : 0.481 +/- 0.158

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 90-135 rho (°): 45-90
Consensus Sequence: XXXXX
(φψ)-conformation: bbabp
Pattern: xxxxx[adegknqrst]xxxx
Conservation:-0.738-0.218-1.026-0.217-0.1680.581-0.216-0.534-0.0352.571
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1agi_*_701agi   -7079LRISKSEFQIEEEESS-EEEbbbxabxbxb
1cpt_*_3181cpt   -318327MRTALADTEVEEEESS-EEEbbbxabxbbb
1cx4_A_2331cx4   A233242TITATSPGALEEEESS-EEEbbbxabxbbb
1czp_A_821czp   A8289..YPTSDVVI..EESS-EEE..xxabpbbb
1dz4_A_2971dz4   A298307GRILTSDYEFEEEESS-EEEbbbxabpbxb
1e0t_A_1411e0t   A143152ICKVLNNGDLEEEE-S-EEExbbxabxbxx
1erj_A_5181erj   A522531TLSIEDGVTTEEE-SS-EEEbbbbabxbab
1eup_A_2911eup   A292301TRFAAEEVEIEEEESS-EEEbbbxabxbbb
1eyq_A_911eyq   A94102RGSKIRELS.EEEESS-EE.bbbxabxbx.
1g24_A_1661g24   A166175DRLEYGYISTEEEESS-EEExbbbaxxbxb
1giq_A_3301giq   A330339VITYPNFISTEEEE-S-EEEbbbbaxxbxb
1gx1_A_231gx1   A2431RIPYEKGL..EE--SSEE..xbpbabxb..
1gxr_A_6491gxr   A653662QHDFTSQIFSEEE-SS-EEEbbbbabxbab
1gxr_A_7321gxr   A735744QSKESSSVLSEEE-SS-EEEbbxxabpbab
1gxy_A_1221gxy   A125133YRGTKTRFH.EEEESS-EE.bbxbaxxbb.
1h54_A_2161h54   A222230RLVTDLKNV.EEEESSEEE.bbbbaxxxb.
1h5z_A_3241h5z   A325334MRVAKGEFEVEEEE-S-EEEbbbxabbbbb
1hx0_A_4611hx0   A461468..SCTGIKVY..EESS-EEE..bbabxbbx
1ihn_A_251ihn   A2533.REYRSDIVV.EEE-S-EEE.bxbabxbbb
1izo_A_2921izo   A294303GALVKKDFVWEEEE-S-EEEbbbxabpbbb
1j58_A_911j58   A94103LHWHKEAEWAEEEESS-EEEpbbbaxxbbb
1jfb_A_2911jfb   A291300KRTAKEDVMIEEEESS-EEEbbbxabpbxb
1jpz_A_3301jpz   A332341SLYAKEDTVLEEEESS-EEEbbbxabpbbx
1k8k_C_2361k8k   C239248TLASETLPLLEEE-SS--EEbbxxabxpxa
1kqr_A_1981kqr   A198207NMTAFCDFYIEEEESS-EEExbbxabxbbb
1li1_A_1071li1   A110119VCEAPAMVMAEEEESS-EEEbbxbabpbbb
1n40_A_2841n40   A285294PRLATADIQVEEEESS-EEEwbbxabxbxb
1n97_A_2711n97   A272281TRRLERPLLLEEEESS-EEEbbbxabpbxb
1nr0_A_4411nr0   A444453EVPISYNSSCEEE-SS-EEEbbxbabbxab
1o5l_A_771o5l   A7786NVVAGENSKIEEEESSSEEEpbbxabpbbb
1o7f_A_1261o7f   A126135TIVTRESSELEEEESSSEEEbbbxabpbbb
1ocx_A_861ocx   A8796VMLDVCPIRIEEE-SS-EEEbbxbabpbbb
1od5_A_561od5   A6069PSYSPYPQMIEEE-SS-EEEpbbbabxbbb
1odo_A_2921odo   A294302LRYAVTDIA.EEEESS-EE.wbbxabpbx.
1ojq_A_1301ojq   A130139IYRENGYSSTEEEESS-EEExbbbaxxbxb
1pgu_A_4001pgu   A402411KHEFGSQPKVEEE-SS-EEEabbxabpxab
1pgu_A_4391pgu   A442451SVRLNSPGSAEEE-SS-EEEbbxxabxbab
1plq_*_1961plq   -196205KLEMDQPVDLEEEESS-EEExbbbabxbbb
1qs1_A_3781qs1   A378387IKEDKGYMSTEEEESS-EEEbbbbaxxbxb
1rwr_A_1191rwr   A122131LTLTTGRPSVEEEE-SEEEEbbbbaxxwbb
1uyr_A_17241uyr   A17251733ITLVTCRSV.EEEESS-EE.bbbxabpbb.
1v3e_A_3101v3e   A310317..SFDQPYAA..EESS-EEE..xxabxbab
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cpt_*_3181cpt   *     HEMPROTOPORPHYRIN IX CONTAINING FE R - 319
1cx4_A_2331cx4   A     CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE T - 233
1cx4_A_2331cx4   A     CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE I - 234
1dz4_A_2971dz4   A     HEMPROTOPORPHYRIN IX CONTAINING FE D - 297
1dz4_A_2971dz4   A     CAMCAMPHOR D - 297
1dz4_A_2971dz4   A     HEMPROTOPORPHYRIN IX CONTAINING FE G - 298
1dz4_A_2971dz4   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 299
1eup_A_2911eup   A     HEMPROTOPORPHYRIN IX CONTAINING FE T - 291
1eup_A_2911eup   A     HEMPROTOPORPHYRIN IX CONTAINING FE T - 292
1eup_A_2911eup   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 293
1eyq_A_911eyq   A     NARNARINGENIN I - 93
1eyq_A_911eyq   A     NARNARINGENIN G - 95
1eyq_A_911eyq   A     SULSULFATE ANION I - 98
1eyq_A_911eyq   A     SULSULFATE ANION R - 99
1eyq_A_911eyq   A     NARNARINGENIN L - 101
1giq_A_3301giq   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE T - 332
1giq_A_3301giq   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE Y - 333
1giq_A_3301giq   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE P - 334
1giq_A_3301giq   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE N - 335
1giq_A_3301giq   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE F - 336
1giq_A_3301giq   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE S - 338
1giq_A_3301giq   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE T - 339
1giq_A_3301giq   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE S - 340
1gx1_A_231gx1   A     MSESELENOMETHIONINE V - 23
1gx1_A_231gx1   A     MSESELENOMETHIONINE I - 25
1gxy_A_1221gxy   A     GOLGLYCEROL Y - 125
1gxy_A_1221gxy   A     GOLGLYCEROL R - 126
1gxy_A_1221gxy   A     GOLGLYCEROL G - 127
1gxy_A_1221gxy   A     GOLGLYCEROL T - 128
1h5z_A_3241h5z   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 324
1h5z_A_3241h5z   A     HEMPROTOPORPHYRIN IX CONTAINING FE M - 325
1h5z_A_3241h5z   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 326
1hx0_A_4611hx0   A     EGLETHYLENE GLYCOL I - 465
1hx0_A_4611hx0   A     EGLETHYLENE GLYCOL K - 466
1hx0_A_4611hx0   A     EGLETHYLENE GLYCOL V - 467
1hx0_A_4611hx0   A     EGLETHYLENE GLYCOL Y - 468
1hx0_A_4611hx0   A     EGLETHYLENE GLYCOL V - 469
1izo_A_2921izo   A     PAMPALMITOLEIC ACID F - 292
1izo_A_2921izo   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 293
1izo_A_2921izo   A     PAMPALMITOLEIC ACID L - 293
1j58_A_911j58   A     MSESELENOMETHIONINE R - 92
1j58_A_911j58   A     MNMANGANESE (II) ION R - 92
1j58_A_911j58   A     FMTFORMIC ACID R - 92
1j58_A_911j58   A     MNMANGANESE (II) ION H - 95
1j58_A_911j58   A     FMTFORMIC ACID H - 95
1j58_A_911j58   A     MNMANGANESE (II) ION W - 96
1j58_A_911j58   A     MNMANGANESE (II) ION H - 97
1j58_A_911j58   A     FMTFORMIC ACID H - 97
1j58_A_911j58   A     MNMANGANESE (II) ION E - 101
1j58_A_911j58   A     FMTFORMIC ACID E - 101
1j58_A_911j58   A     MSESELENOMETHIONINE A - 103
1jfb_A_2911jfb   A     HEMPROTOPORPHYRIN IX CONTAINING FE K - 291
1jfb_A_2911jfb   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 292
1jfb_A_2911jfb   A     GOLGLYCEROL R - 292
1jfb_A_2911jfb   A     GOLGLYCEROL K - 295
1jpz_A_3301jpz   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 330
1jpz_A_3301jpz   A     140N-PALMITOYLGLYCINE A - 330
1jpz_A_3301jpz   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 331
1jpz_A_3301jpz   A     140N-PALMITOYLGLYCINE F - 331
1jpz_A_3301jpz   A     HEMPROTOPORPHYRIN IX CONTAINING FE S - 332
1n40_A_2841n40   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 284
1n40_A_2841n40   A     HEMPROTOPORPHYRIN IX CONTAINING FE P - 285
1n40_A_2841n40   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 286
1n97_A_2711n97   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 271
1n97_A_2711n97   A     HEMPROTOPORPHYRIN IX CONTAINING FE T - 272
1n97_A_2711n97   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 273
1n97_A_2711n97   A     EGLETHYLENE GLYCOL R - 273
1n97_A_2711n97   A     EGLETHYLENE GLYCOL R - 277
1ocx_A_861ocx   A     PBMTRIMETHYL LEAD ION L - 89
1od5_A_561od5   A     CO3CARBONATE ION H - 58
1od5_A_561od5   A     CO3CARBONATE ION Q - 67
1od5_A_561od5   A     CO3CARBONATE ION I - 69
1odo_A_2921odo   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 292
1odo_A_2921odo   A     PIM4-PHENYL-1H-IMIDAZOLE L - 292
1odo_A_2921odo   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 295
1uyr_A_17241uyr   A     D1L2-[4-(2,4-DICHLOROPHENOXY)PHENOXY]PROPANOIC ACID V - 1733
1v3e_A_3101v3e   A     CACALCIUM ION Y - 315
1v3e_A_3101v3e   A     CACALCIUM ION A - 316
1v3e_A_3101v3e   A     CACALCIUM ION A - 317
1v3e_A_3101v3e   A     ZMRZANAMIVIR Y - 319
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gxy_A_1221gxy   A GOAGOL BINDING SITE FOR CHAIN AR - 126
1gxy_A_1221gxy   A GOAGOL BINDING SITE FOR CHAIN AG - 127
1od5_A_561od5   A AC1CO3 BINDING SITE FOR CHAIN AH - 58

Clusters included in this Subclass
CLUSTER: AR.2.13
CLUSTER: AR.3.5
CLUSTER: AR.4.4