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Information on SUBCLASS 2.6.2
Subclass Accession number: 160
Subclass: 2.6.2 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 12

Average sequence ID (%) : 12.6 +/- 15.2
Average RMSD (Å) : 0.575 +/- 0.238

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XpXXhX
(φψ)-conformation: aabpbb
Pattern: [acilp][aciklt][adeknrst][aeknqt]x[dhnpqr][citvy]xx
Conservation:1.140-0.103-0.271-0.220-0.406-0.6032.120-1.123-0.534
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1e5x_A_2471e5x   A251259ITAELPIYLHHHHS-EEEaaaabxbxx
1g9m_G_3691g9m   G369377PEIVTHSFNHHHHTEEEEaaaabxxbb
1ixk_A_2551ixk   A261269ALDNFDVELHHHHSSEEEaaaabxbbx
1jc9_A_1271jc9   A133141LTNQRNYMIHHHHS-EEEaaaabxbbb
1khq_A_1181khq   A124132SIANQPVSVHHHHS-EEEaaaabpbxb
1kwm_A_201kwm   A2937LASTTQIDFHHHHS-EEEaaaabxbbx
1nnw_A_501nnw   A6068LTKKENVKIHHHHS-EEEaaaabxbbb
1ogc_A_511ogc   A5866LAEEMAVEKHHHHS-EEEaaaabxbab
1ro2_A_1241ro2   A130138LCRKTLCTNHHHHS-EEEaaaabxbbx
1uqt_A_1871uqt   A197205LSNLTRVTTHHHHS-EEEaaaabxbxb
1v7c_A_1341v7c   A144152LTEAFPVALHHHHSS-EEaaaabxbxx
1xo1_A_1051xo1   A115122CKTTFPTF.HHTTS-EE.aaaabwbb.
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1e5x_A_2471e5x   A     MSESELENOMETHIONINE L - 247
1e5x_A_2471e5x   A     MSESELENOMETHIONINE I - 248
1e5x_A_2471e5x   A     MSESELENOMETHIONINE R - 249
1e5x_A_2471e5x   A     MSESELENOMETHIONINE E - 250
1e5x_A_2471e5x   A     MSESELENOMETHIONINE I - 251
1e5x_A_2471e5x   A     MSESELENOMETHIONINE E - 254
1e5x_A_2471e5x   A     MSESELENOMETHIONINE L - 255
1e5x_A_2471e5x   A     MSESELENOMETHIONINE L - 259
1g9m_G_3691g9m   G     IOH2-PROPANOL, ISOPROPANOL E - 370
1g9m_G_3691g9m   G     NAGN-ACETYL-D-GLUCOSAMINE V - 372
1g9m_G_3691g9m   G     NAGN-ACETYL-D-GLUCOSAMINE T - 373
1g9m_G_3691g9m   G     IOH2-PROPANOL, ISOPROPANOL S - 375
1g9m_G_3691g9m   G     IOH2-PROPANOL, ISOPROPANOL F - 376
1g9m_G_3691g9m   G     NAGN-ACETYL-D-GLUCOSAMINE N - 377
1g9m_G_3691g9m   G     IOH2-PROPANOL, ISOPROPANOL N - 377
1ixk_A_2551ixk   A     MSESELENOMETHIONINE V - 257
1ixk_A_2551ixk   A     MSESELENOMETHIONINE W - 260
1ixk_A_2551ixk   A     MSESELENOMETHIONINE F - 265
1v7c_A_1341v7c   A     HEY(2E)-2-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL] PYRIDIN-4-YL}METHYL)AMINO]-5-PHOSPHONOPENT-2-ENOIC ACID F - 134
1v7c_A_1341v7c   A     HEY(2E)-2-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL] PYRIDIN-4-YL}METHYL)AMINO]-5-PHOSPHONOPENT-2-ENOIC ACID L - 138

Clusters included in this Subclass
CLUSTER: HE.2.22
CLUSTER: HE.3.46