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Information on SUBCLASS 1.2.3
Subclass Accession number: 1620
Subclass: 1.2.3 PSSM
Type: AR beta-beta link
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : - (>75 %)  
GO : GO:0005507 (>75 %)  GO:0015036 (>50 %)  
SCOP : 49502 (>75 %)  49503 (>75 %)  49550 (>75 %)  51904 (>75 %)  51905 (>75 %)  51943 (>50 %)  
Number of loops: 15

Average sequence ID (%) : 14.4 +/- 16.4
Average RMSD (Å) : 0.427 +/- 0.215

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 90-135 rho (°): 180-225
Consensus Sequence: XXXXX
(φψ)-conformation: bblbb
Pattern: [FILVWY]x[fglptv][degns][aekqrst]x[akv][cekqrst][aegknqrs]
Conservation:1.336-0.099-1.0371.221-0.561-0.8231.314-0.601-0.748
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b37_A_2311b37   A231239LQLNKVVREEESS--EEEbbxvbxxab
1d7y_A_2031d7y   A204212LRFERSVTGEEES--EEExbxvbbxae
1d7y_A_751d7y   A7684WLLGVTAQSEEET--EEEbxxvbbxae
1fec_A_2461fec   A248256VRTHENPAKEEET--EEExbxlbbxab
1fl2_A_2821fl2   A284292VIDSQSASKEE-S--EEExbbvbbxab
1jmk_C_1001jmk   C104111IMVDSYKK.EEES--EE.bbblbbxx.
1kdg_A_4201kdg   A422430FKTNVMVSNEE-S--EEEbbxlbbxab
1m6i_A_2241m6i   A227235VLTGKKVVQEEET--EEEbbxvbbxab
1m6i_A_3621m6i   A363371VMPNAIVQSEE-S--EEExbxlbbxab
1mo9_A_1521mo9   A152160YILNCPAKVEEESS--EEbbbvbxxbx
1nhp_*_2061nhp   -208216IATGETVEREEES--EEEbbxvbxxab
1pj5_A_1671pj5   A168176YRGSTTVTGEE-S--EEEbbxlbbxab
1q1r_A_2071q1r   A208216IRTGTQVCGEE-S--EEExbxlbbxae
1q1r_A_751q1r   A7785LLGGTQVTAEE-S--EEEbbxlbxxab
1s3e_A_2291s3e   A229237VKLERPVIYEESS--EEExbxlbxxab
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1b37_A_2311b37   A     FADFLAVIN-ADENINE DINUCLEOTIDE K - 235
1b37_A_2311b37   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 236
1b37_A_2311b37   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 237
1b37_A_2311b37   A     FADFLAVIN-ADENINE DINUCLEOTIDE R - 238
1d7y_A_751d7y   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 80
1d7y_A_751d7y   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 81
1d7y_A_751d7y   A     FADFLAVIN-ADENINE DINUCLEOTIDE A - 82
1d7y_A_751d7y   A     FADFLAVIN-ADENINE DINUCLEOTIDE Q - 83
1fl2_A_2821fl2   A     FADFLAVIN-ADENINE DINUCLEOTIDE Q - 288
1fl2_A_2821fl2   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 289
1fl2_A_2821fl2   A     FADFLAVIN-ADENINE DINUCLEOTIDE A - 290
1fl2_A_2821fl2   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 291
1kdg_A_4201kdg   A     MANALPHA-D-MANNOSE T - 421
1kdg_A_4201kdg   A     6FA6-HYDROXY-FLAVIN-ADENINE DINUCLEOTIDE V - 426
1kdg_A_4201kdg   A     6FA6-HYDROXY-FLAVIN-ADENINE DINUCLEOTIDE M - 427
1kdg_A_4201kdg   A     6FA6-HYDROXY-FLAVIN-ADENINE DINUCLEOTIDE V - 428
1kdg_A_4201kdg   A     6FA6-HYDROXY-FLAVIN-ADENINE DINUCLEOTIDE S - 429
1kdg_A_4201kdg   A     NAGN-ACETYL-D-GLUCOSAMINE N - 434
1m6i_A_2241m6i   A     FADFLAVIN-ADENINE DINUCLEOTIDE K - 231
1m6i_A_2241m6i   A     FADFLAVIN-ADENINE DINUCLEOTIDE K - 232
1m6i_A_2241m6i   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 233
1m6i_A_2241m6i   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 234
1mo9_A_1521mo9   A     FADFLAVIN-ADENINE DINUCLEOTIDE C - 156
1mo9_A_1521mo9   A     FADFLAVIN-ADENINE DINUCLEOTIDE P - 157
1mo9_A_1521mo9   A     FADFLAVIN-ADENINE DINUCLEOTIDE A - 158
1mo9_A_1521mo9   A     FADFLAVIN-ADENINE DINUCLEOTIDE K - 159
1pj5_A_1671pj5   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 172
1pj5_A_1671pj5   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 173
1pj5_A_1671pj5   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 174
1pj5_A_1671pj5   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 175
1q1r_A_751q1r   A     FADFLAVIN-ADENINE DINUCLEOTIDE Q - 82
1q1r_A_751q1r   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 83
1q1r_A_751q1r   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 84
1s3e_A_2291s3e   A     FADFLAVIN-ADENINE DINUCLEOTIDE R - 233
1s3e_A_2291s3e   A     FADFLAVIN-ADENINE DINUCLEOTIDE P - 234
1s3e_A_2291s3e   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 235
1s3e_A_2291s3e   A     FADFLAVIN-ADENINE DINUCLEOTIDE I - 236

Clusters included in this Subclass
CLUSTER: AR.2.37
CLUSTER: AR.3.22
CLUSTER: AR.4.16