ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 3.4.1

Subclass Accession number: 165
Subclass: 3.4.1
Type: HH alpha-alpha
DB: ArchDB-KI

Number of loops: 4

Average sequence ID (%) : 96.9 +/- 0.1
Average RMSD (Å) : 0.18 +/- 0.02

Consensus geometry

d (Å): 13

delta (°): 45-90

theta (°): 135-180

rho (°): 180-225

Consensus Sequence:	SHSTDLM
(φψ)-conformation:	aapapaa

Pattern:	[H]	[R]	[K]	[L]	[F]	[E]	[E]	[L]	[AV]	[R]	x	[S]	[S]	[H]	[S]	[T]	[D]	[L]	[M]	[E]	[A]	[M]	[A]	[M]	[G]	[S]	[V]	[E]	[A]	[S]	[Y]	[K]
Conservation:	2.499	0.158	0.158	-0.622	0.939	0.158	0.158	-0.622	-2.182	0.158	-1.792	-0.622	-0.622	2.499	-0.622	0.158	0.939	-0.622	0.158	0.158	-0.622	0.158	-0.622	0.158	0.939	-0.622	-0.622	0.158	-0.622	-0.622	1.719	0.158

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1a49_A_390	1a49	A	390	421	HRKLFEELARSSSHSTDLMEAMAMGSVEASYK	HHHHHHHHHHHHTT---HHHHHHHHHHHHHHH	aaaaaaaaaaaaaaxapaaaaaaaaaaaaaaa
1aqf_A_390	1aqf	A	390	421	HRKLFEELARSSSHSTDLMEAMAMGSVEASYK	HHHHHHHHHHHTTT---HHHHHHHHHHHHHHH	aaaaaaaaaaaaaaxapaaaaaaaaaaaaaaa
1pkm_*_390	1pkm	-	390	421	HRKLFEELVRGSSHSTDLMEAMAMGSVEASYK	HHHHHHHHHHHHTT---HHHHHHHHHHHHHHH	aaaaaaaaaaaaaaxapaaaaaaaaaaaaaaa
1pkn_*_390	1pkn	-	390	421	HRKLFEELARSSSHSTDLMEAMAMGSVEASYK	HHHHHHHHHHHGGG---HHHHHHHHHHHHHHH	aaaaaaaaaaaaaaxaxaaaaaaaaaaaaaaa

Clusters included in this Subclass