Logo
Information on SUBCLASS 3.1.3
Subclass Accession number: 1680
Subclass: 3.1.3 PSSM
Type: AR beta-beta link
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
SCOP : 51160 (>75 %)  51161 (>75 %)  
Number of loops: 11

Average sequence ID (%) : 11.4 +/- 14.4
Average RMSD (Å) : 0.591 +/- 0.187

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: hhXpXph
(φψ)-conformation: bbplpbb
Pattern: x[filmy][agipv]x[DEGKNQT][AGSTV][ehkqsty][acilv]
Conservation:-0.6000.042-0.679-1.5760.5961.470-0.2971.044
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1fi2_A_731fi2   A7885DFAPGGTNEE-TT-EEbbxpvxbx
1g97_A_2971g97   A297303.YVVDSTI.EEES-EE.bbblbbb
1g97_A_3131g97   A313319.MIEESSV.EEES-EE.bbblbbb
1g97_A_3361g97   A336343SLGAQVHIEE-TT-EEbbxpvxbb
1g97_A_3531g97   A353360SIGENTKAEE-TT-EEbbxpvxbb
1i5z_A_191i5z   A2229KYPSKSTLEE-TT-EEbbxpvxxa
1l0s_A_281l0s   A3037SEVFGTTCEEEES-EEbbbblbbb
1qre_A_1141qre   A114121SLAHQSQVEE-TT-EEbbxpvxbb
1qre_A_1321qre   A132139FIGMQAFVEE-TT-EExbxpvxbb
1ro2_A_1681ro2   A172179LQSYNSYVEE-TT-EEbxbpvbbb
1uyr_A_19851uyr   A19881995YIPPTGELEE-TT-EEbxwxvxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1fi2_A_731fi2   A     MNMANGANESE (II) ION N - 85
1fi2_A_731fi2   A     MNMANGANESE (II) ION H - 88
1i5z_A_191i5z   A     CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE I - 30
1l0s_A_281l0s   A     TYI3,5-DIIODOTYROSINE D - 28
1l0s_A_281l0s   A     CDCADMIUM ION D - 28
1l0s_A_281l0s   A     TYI3,5-DIIODOTYROSINE C - 37
1qre_A_1141qre   A     OCNCOBALT ION, 2 WATERS COORDINATED Q - 120
1qre_A_1141qre   A     BCTBICARBONATE ION H - 122
1qre_A_1141qre   A     OCNCOBALT ION, 2 WATERS COORDINATED H - 122
1qre_A_1141qre   A     OCNCOBALT ION, 2 WATERS COORDINATED G - 123
1ro2_A_1681ro2   A     MNMANGANESE (II) ION Q - 173
1uyr_A_19851uyr   A     D1L2-[4-(2,4-DICHLOROPHENOXY)PHENOXY]PROPANOIC ACID R - 1996

Clusters included in this Subclass
CLUSTER: AR.3.49
CLUSTER: AR.4.162
CLUSTER: AR.5.66