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Information on SUBCLASS 3.2.2
Subclass Accession number: 1688
Subclass: 3.2.2 PSSM
Type: AR beta-beta link
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 32

Average sequence ID (%) : 7.6 +/- 12.2
Average RMSD (Å) : 0.812 +/- 0.249

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 45-90 rho (°): 180-225
Consensus Sequence: XXpXXXX
(φψ)-conformation: bbabpbb
Pattern: xxxxxxxxx
Conservation:-1.000-0.608-0.8020.249-0.0440.849-1.034-0.5641.953
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aoz_A_4131aoz   A413421RIGNGVYQFEEE---EEEbxbaxbxbb
1b1c_A_1381b1c   A138145.QRIFELGL.EE-S--EE.bxabpxxb
1cg2_A_1951cg2   A196203VLSFEPTS.EEE---EE.bbbaxxbx.
1cpt_*_3981cpt   -401409VELSGPPRLEEESS--EEbbxabxpbx
1cse_I_621cse   I6269.VVNHVPHV.EE-S--EE.bxabxwbx
1dj7_B_61dj7   B715VRVTSSVVVEEE-S--EEbbxaxxbxb
1ej8_A_1491ej8   A151159HKFDEPIECEE--S-EEEbbxaxxbxb
1f4p_A_1181f4p   A118125.EIVQDGLR.EE-S--EE.bxabpxxb
1ga6_A_1291ga6   A130137INVSLGWC.EEE---EE.bxbabbbp.
1gvp_*_761gvp   -7684LMIDRLRLVEEESS--EExbxabxbbb
1hxr_A_371hxr   A3745LFSRRQLFLEEE---EEEbxbaxxbxb
1j18_A_4921j18   A494502SWQTIQQSWEE-SS-EEEbbxaxxxbb
1ja1_A_1981ja1   A198205.QRIFELGL.EESS--EE.bxabpxbb
1k0g_A_1791k0g   A179186.TLTSDWQS.EE-S--EE.bxabxxbx
1ki1_B_15111ki1   B15121520QYMYKTPIFEEE-SS-EEbxpFxxpxx
1m44_A_1321m44   A132140LPWHGPTSVEE--S-EEEbxxaxxxbb
1msw_D_5291msw   D529536.NCSLPLAF.EE---EEE.xbaxxxxb
1nvm_B_2411nvm   B241249YRLKQQVQFEEESS--EExbxabxxbb
1ocv_A_641ocv   A6573VELTQEVRAEEE-S--EEbbxabpxbb
1oh0_A_671oh0   A6876ACLTGPVRAEEESS--EEbbxabxxxb
1pv9_A_1751pv9   A175182.KPAFDTII.EESS--EE.bxabxpxb
1q5d_A_3901q5d   A390397.KLKETPVF.EE-S--EE.bxabpxxb
1qd6_C_331qd6   C3340.YPYDTNYL.EE-S--EE.bxaxxbbb
1s18_A_731s18   A7684EWDKDHGVLEE-SS-EEEbbpabbbxb
1s5d_A_1341s5d   A134141VLDEQLHR.EE-S--EE.xxxaxxxx.
1uad_C_851uad   C8592.TSTVSFKL.EESS--EE.bbabbbbx
1ug6_A_2781ug6   A281289VNYYAPVRVEEES--EEEbbbabxbbb
1ukf_A_1681ukf   A168175.SLRREPKT.EE-S--EE.bxabxpbb
1xgs_A_471xgs   A4754.KPAFPVNL.EESS--EE.bxabxpxb
3cla_*_823cla   -8492IVWDSVDPQEEES--EEEbbxabbbwb
3ull_A_173ull   A2129GRVGQDPVLEEE-S--EEbbxabxpbx
5nul_*_1095nul   -109116.VVVETPLI.EE-S--EE.bxabxpxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cg2_A_1951cg2   A     ZNZINC ION E - 200
1cg2_A_1951cg2   A     ZNZINC ION P - 201
1f4p_A_1181f4p   A     FMNFLAVIN MONONUCLEOTIDE I - 126
1ga6_A_1291ga6   A     ACTACETATE ION V - 132
1ga6_A_1291ga6   A     ACTACETATE ION S - 133
1ga6_A_1291ga6   A     ACTACETATE ION L - 134
1ga6_A_1291ga6   A     ACTACETATE ION G - 135
1ga6_A_1291ga6   A     ACTACETATE ION W - 136
1j18_A_4921j18   A     GLCGLUCOSE W - 495
1j18_A_4921j18   A     GLCGLUCOSE Q - 496
1j18_A_4921j18   A     GLCGLUCOSE T - 497
1j18_A_4921j18   A     GLCGLUCOSE Q - 499
1oh0_A_671oh0   A     EQUEQUILENIN A - 68
1pv9_A_1751pv9   A     ZNZINC ION F - 178
1qd6_C_331qd6   C     HDS1-HEXADECANOSULFONIC ACID N - 38
1qd6_C_331qd6   C     HDS1-HEXADECANOSULFONIC ACID Y - 39
1qd6_C_331qd6   C     HDS1-HEXADECANOSULFONIC ACID L - 40
1s18_A_731s18   A     TMNTRIS(HYDROXYMETHYL)AMINOMETHANE D - 78
1s18_A_731s18   A     TMNTRIS(HYDROXYMETHYL)AMINOMETHANE L - 84
1ug6_A_2781ug6   A     GOLGLYCEROL N - 282
1ug6_A_2781ug6   A     GOLGLYCEROL Y - 284
1xgs_A_471xgs   A     COCOBALT (II) ION F - 50
3cla_*_823cla   *     COCOBALT (II) ION D - 87
3cla_*_823cla   *     CLMCHLORAMPHENICOL Q - 92
3cla_*_823cla   *     CLMCHLORAMPHENICOL T - 94
5nul_*_1095nul   *     FMNFLAVIN MONONUCLEOTIDE V - 117
5nul_*_1095nul   *     FMNFLAVIN MONONUCLEOTIDE Q - 118
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1cg2_A_1951cg2   A CTACATALYTIC SITE.E - 200

Clusters included in this Subclass
CLUSTER: AR.3.16
CLUSTER: AR.4.8
CLUSTER: AR.5.15
CLUSTER: AR.5.29