Information on SUBCLASS 3.2.3 |
Subclass Accession number: 1689
Subclass: 3.2.3 Type: AR beta-beta link DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 11 Average sequence ID (%) : 11.1 +/- 13.1 Average RMSD (Å) : 0.745 +/- 0.211 Consensus geometry
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Consensus Sequence: | hpXpXXX |
(φψ)-conformation: | bbabpbb |
Pattern: | x | x | x | [gnst] | [adkqs] | [dhkrs] | x | x | [AFIKLTV] |
Conservation: | -0.871 | -0.869 | 0.034 | 2.206 | 0.414 | -0.029 | -0.755 | -0.724 | 0.594 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cb8_A_635 | 1cb8 | A | 636 | 644 | EIETDKPCA | EEEESS-EE | bbbbabxbb |
1ewq_A_546 | 1ewq | A | 546 | 553 | .RFGDRLQI | .EESSS-EE | .bbbabxbb |
1gui_A_104 | 1gui | A | 110 | 118 | VNLTADWQT | EEE-SS-EE | bxxbabpbb |
1h54_A_216 | 1h54 | A | 222 | 230 | RLVTDLKNV | EEEESSEEE | bbbbaxxxb |
1hnf_*_140 | 1hnf | - | 141 | 149 | LKLSQRVIT | EEEESS-EE | abbbaxxxb |
1ig0_A_295 | 1ig0 | A | 297 | 305 | FIDTKDDII | EEEESS-EE | bbbbabpbx |
1ig3_A_246 | 1ig3 | A | 248 | 256 | TVETDHPLL | EEEESS-EE | bbbbabpbx |
1n9p_A_261 | 1n9p | A | 261 | 269 | QLFLVSPLT | EEE-SS-EE | xxbxabpbx |
1nsz_A_150 | 1nsz | A | 156 | 164 | EAISDKDTV | EEEESS-EE | bbbbabpbb |
1rhy_A_108 | 1rhy | A | 114 | 122 | IDISSRPYF | EE-SS--EE | bbxbabxbb |
1tul_*_84 | 1tul | - | 86 | 94 | IMFNCAEIK | EEEESS-EE | bbbxabxxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ewq_A_546 | 1ewq | A | MSESELENOMETHIONINE | D - 549 |
1ewq_A_546 | 1ewq | A | MSESELENOMETHIONINE | R - 550 |
1ewq_A_546 | 1ewq | A | MSESELENOMETHIONINE | L - 551 |
1ewq_A_546 | 1ewq | A | MSESELENOMETHIONINE | Q - 552 |
1gui_A_104 | 1gui | A | GOLGLYCEROL | N - 104 |
1gui_A_104 | 1gui | A | BGCBETA-D-GLUCOSE | N - 104 |
1gui_A_104 | 1gui | A | GOLGLYCEROL | Y - 105 |
1gui_A_104 | 1gui | A | GOLGLYCEROL | F - 106 |
1gui_A_104 | 1gui | A | GOLGLYCEROL | A - 107 |
1gui_A_104 | 1gui | A | GOLGLYCEROL | Q - 108 |
1gui_A_104 | 1gui | A | GOLGLYCEROL | T - 109 |
1gui_A_104 | 1gui | A | GOLGLYCEROL | A - 114 |
1gui_A_104 | 1gui | A | GOLGLYCEROL | W - 116 |
1n9p_A_261 | 1n9p | A | MSESELENOMETHIONINE | L - 264 |
1n9p_A_261 | 1n9p | A | MSESELENOMETHIONINE | T - 269 |
1rhy_A_108 | 1rhy | A | HGMERCURY (II) ION | F - 122 |
1rhy_A_108 | 1rhy | A | EMCETHYL MERCURY ION | F - 122 |
1rhy_A_108 | 1rhy | A | HGMERCURY (II) ION | M - 123 |
1rhy_A_108 | 1rhy | A | EMCETHYL MERCURY ION | M - 123 |
1rhy_A_108 | 1rhy | A | HGMERCURY (II) ION | C - 124 |
1rhy_A_108 | 1rhy | A | EMCETHYL MERCURY ION | C - 124 |
1rhy_A_108 | 1rhy | A | HGMERCURY (II) ION | H - 125 |
1rhy_A_108 | 1rhy | A | EMCETHYL MERCURY ION | H - 125 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gui_A_104 | 1gui | A | AC6GOL BINDING SITE FOR CHAIN A | N - 104 |
1gui_A_104 | 1gui | A | AC6GOL BINDING SITE FOR CHAIN A | Y - 105 |
1gui_A_104 | 1gui | A | AC6GOL BINDING SITE FOR CHAIN A | F - 106 |
1gui_A_104 | 1gui | A | AC5GOL BINDING SITE FOR CHAIN A | A - 107 |
1gui_A_104 | 1gui | A | AC5GOL BINDING SITE FOR CHAIN A | Q - 108 |
1gui_A_104 | 1gui | A | AC5GOL BINDING SITE FOR CHAIN A | T - 109 |
1gui_A_104 | 1gui | A | AC5GOL BINDING SITE FOR CHAIN A | N - 111 |
1gui_A_104 | 1gui | A | AC3GOL BINDING SITE FOR CHAIN A | W - 116 |
Clusters included in this Subclass |
CLUSTER: AR.2.73 |
CLUSTER: AR.3.124 |
CLUSTER: AR.3.134 |
CLUSTER: AR.4.87 |
CLUSTER: AR.5.183 |