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Information on SUBCLASS 3.4.1
Subclass Accession number: 1714
Subclass: 3.4.1 PSSM
Type: AR beta-beta link
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
SCOP : 51350 (>75 %)  
Number of loops: 54

Average sequence ID (%) : 9.7 +/- 12.6
Average RMSD (Å) : 0.494 +/- 0.226

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 45-90 rho (°): 90-135
Consensus Sequence: hXXXXhX
(φψ)-conformation: bpaaabb
Pattern: x[afgilvwy][dhknpqrst]x[adegknqrst]x[acfgikltv]xxx
Conservation:-0.8071.426-0.330-0.8060.354-0.2881.776-0.265-1.061-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1azp_A_111azp   A1423EVDTSKIKKVEEEGGGEEEEbbxaaaxaxb
1b12_A_2871b12   A287295.VPEANLVGR.EEGGGEEEE.bxaaaxabb
1b34_A_531b34   A5968SIRGNNIRYFEE-GGGEEEEbbxaaababx
1bbz_A_441bbz   A4755WVPSNYITP.EEEGGGEEE.xbxaaabbx.
1btk_A_481btk   A5564SIDVEKITCVEEEGGGEEEEbbxaaaxabb
1cka_A_1791cka   A181188MIPVPYVE..EEEGGGEE..xbxaaabb..
1doi_*_981doi   -98106VRLTCIGSP.EEEGGGEEE.xbbaaabbx.
1enf_A_1981enf   A198207TLKSDDISHIEEEGGGEEEEbbxaaaxabb
1f8f_A_1481f8f   A150159LSRENNTVKVEEEGGGEEEEbbbaaabbxb
1fit_*_81fit   -918LIKPSVVFLKEE-GGGEEEExbxaaaxabb
1g38_A_4041g38   A404412PVRREYGFH.EE-TTTEEE.wbxaaabbx.
1g8l_A_1101g8l   A111120VVMQEQTEQMEEEGGGEEEEbbxaaabbxb
1gcq_C_6461gcq   C649657WFPCNRVHP.EEEGGGEEE.bbxaaabbp.
1gtr_A_3841gtr   A386393WIDRADFR..EEEGGGEE..bbxaaabb..
1gu7_A_1351gu7   A137146LGNDDDFIKLEEEGGGEEEEbbxaaabbxb
1h0b_A_791h0b   A7987.RRVQELSDV.EEGGGEEEE.bxaaaxabb
1h4r_A_2541h4r   A255264SFPWNEIRNIEEEGGGEEEEbbwaaababb
1het_A_1491het   A151159VVDEISVAK.EEEGGGEEE.bbxaaabbx.
1hxr_A_1131hxr   A114122YVALERVSH.EEEGGGEEE.bbxaaabbb.
1iq8_A_5261iq8   A526534.VFAKFVIFA.EEGGGEEEE.bxaaaxabb
1j0w_A_491j0w   A5261SWPLSALRRYEEEGGGEEEEbbxaaaxabb
1j71_A_1741j71   A174183GVDNAKYTGTEEETTSEEEEbbbaaabbeb
1jb0_E_571jb0   E5967NFALHEVQE.EE-GGGEEE.bbxaaabbx.
1jd0_A_321jd0   A3240DLHSDILQY.EE-GGGEEE.xbbaaabbx.
1jo8_A_461jo8   A4856LFPSNYVSL.EEEGGGEEE.xbxaaabbp.
1ki1_B_15191ki1   B15191527.IFLNEVLVK.EEGGGEEEE.xxaaabbbb
1kq1_A_511kq1   A5463LIYKHAISTYEEEGGGEEEExbxaaaxabb
1l1d_A_4281l1d   A429436LFSSADKY..EEEGGGEE..abbaaaxb..
1lw3_A_1231lw3   A126135DASLGVINRVEEEGGGEEEEbbxaaaxabb
1m4v_A_1901m4v   A190199VIDGRNIEKMEEEGGGEEEEbbxaaaxabb
1mai_*_661mai   -6675LFSIEDIQEVEEEGGGEEEEbbxaaababb
1n9p_A_3121n9p   A315323SYTEDEVLW.EEEGGGEEE.bbxaaabxx.
1nba_A_1911nba   A193200IIPRETIG..EEEGGGEE..bbxaaabb..
1nbc_A_321nbc   A3240.IDLSKLTLR.EEGGGEEEE.bxaaabbbb
1ng2_A_2711ng2   A274282YFPSMYLQK.EEEGGGEEE.xbxaaabbp.
1ntv_A_1041ntv   A107116HHAVHEISYIEE-GGGEEEEbbxaaaxabb
1omw_A_5991omw   A600609LLTMEEIQSVEEEGGGEEEEbbxaaaxaeb
1ou8_A_781ou8   A8392YIPMGAALAIEEEGGGEEEEbbxaaaxabb
1oxx_K_2711oxx   K275284GIRPEDVKLSEE-GGGEEEEbbxaaabbbb
1p2z_A_931p2z   A93101.LDMASTYFD.EEGGGEEEE.bxaaabbxx
1p5t_A_481p5t   A5362FWPYTLLRRYEEEGGGEEEEbbpaaaxabb
1pg6_A_1711pg6   A171179.IDNAHVVAW.EEGGGEEEE.bpaaaxabb
1pwt_*_481pwt   -5159FVPAAYVKK.EEEGGGEEE.xbpaaabbp.
1qor_A_981qor   A100108NIIADKAAI.EEEGGGEEE.xbxaaabbx.
1qqg_A_2041qqg   A205214VLQLMNIRRCEEEGGGEEEEbxxaaaxabb
1qqg_A_621qqg   A6372SIPLESCFNIEEEGGGEEEEbbxaaaxabb
1rkd_*_821rkd   -8290.IDITPVSVI.EE-TTEEEE.bxaaaxxbx
1s5d_A_1191s5d   A119127.IPYSQIYGW.EEGGGEEEE.bwaaaxaeb
1uz5_A_1131uz5   A114123VIQFEDVERVEEEGGGEEEEbxpaaabbxb
1vie_*_661vie   -6876IYPVAALER.EEEGGGEEE.bbxaaabbx.
2ahj_B_1982ahj   B202210DLFEGYLEP.EEEGGGEEE.xbpaaabbx.
2mcm_*_812mcm   -8594TVNCKVVSCSEEETTTS-EExbbaaabxbb
3tss_*_1813tss   -181189.INIDEIKTI.EEGGGEEEE.bxaaaxabb
3vub_*_693vub   -7079SVPVSVIGEEEEEGGGEEEExbxaaaxxxx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1doi_*_981doi   *     FESFE2/S2 (INORGANIC) CLUSTER L - 100
1doi_*_981doi   *     FESFE2/S2 (INORGANIC) CLUSTER T - 101
1doi_*_981doi   *     FESFE2/S2 (INORGANIC) CLUSTER C - 102
1doi_*_981doi   *     FESFE2/S2 (INORGANIC) CLUSTER I - 103
1fit_*_81fit   *     MSESELENOMETHIONINE S - 13
1fit_*_81fit   *     MSESELENOMETHIONINE V - 14
1iq8_A_5261iq8   A     MGMAGNESIUM ION A - 528
1iq8_A_5261iq8   A     MGMAGNESIUM ION K - 529
1iq8_A_5261iq8   A     MGMAGNESIUM ION F - 530
1iq8_A_5261iq8   A     MGMAGNESIUM ION V - 531
1iq8_A_5261iq8   A     MGMAGNESIUM ION I - 532
1j0w_A_491j0w   A     MSESELENOMETHIONINE P - 54
1j0w_A_491j0w   A     MSESELENOMETHIONINE A - 57
1j71_A_1741j71   A     EOHETHANOL V - 175
1j71_A_1741j71   A     EOHETHANOL L - 184
1j71_A_1741j71   A     EOHETHANOL A - 186
1jo8_A_461jo8   A     SULSULFATE ANION V - 54
1jo8_A_461jo8   A     SULSULFATE ANION S - 55
1jo8_A_461jo8   A     SULSULFATE ANION L - 56
1n9p_A_3121n9p   A     MSESELENOMETHIONINE A - 312
1n9p_A_3121n9p   A     MSESELENOMETHIONINE R - 313
1n9p_A_3121n9p   A     MSESELENOMETHIONINE E - 318
1n9p_A_3121n9p   A     MSESELENOMETHIONINE V - 321
1n9p_A_3121n9p   A     MSESELENOMETHIONINE L - 322
1n9p_A_3121n9p   A     MSESELENOMETHIONINE W - 323
1nbc_A_321nbc   A     CACALCIUM ION Y - 43
1oxx_K_2711oxx   K     IODIODIDE ION R - 271
1oxx_K_2711oxx   K     IODIODIDE ION I - 273
1p2z_A_931p2z   A     CITCITRIC ACID D - 94
1p2z_A_931p2z   A     CITCITRIC ACID M - 95
1p2z_A_931p2z   A     CITCITRIC ACID A - 96
1p5t_A_481p5t   A     MSESELENOMETHIONINE G - 63
1pg6_A_1711pg6   A     MSESELENOMETHIONINE I - 171
1pg6_A_1711pg6   A     CACALCIUM ION I - 171
2mcm_*_812mcm   *     CACALCIUM ION W - 83
2mcm_*_812mcm   *     MPD2-METHYL-2,4-PENTANEDIOL S - 92
2mcm_*_812mcm   *     MPD2-METHYL-2,4-PENTANEDIOL C - 93
2mcm_*_812mcm   *     MPD2-METHYL-2,4-PENTANEDIOL S - 94
2mcm_*_812mcm   *     MPD2-METHYL-2,4-PENTANEDIOL A - 95
2mcm_*_812mcm   *     MPD2-METHYL-2,4-PENTANEDIOL G - 96
2mcm_*_812mcm   *     MPD2-METHYL-2,4-PENTANEDIOL L - 97
2mcm_*_812mcm   *     MPD2-METHYL-2,4-PENTANEDIOL G - 98
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1doi_*_981doi   * 22FE2S2 IRON-SULFUR REDOX CENTER.C - 102

Clusters included in this Subclass
CLUSTER: AR.2.16
CLUSTER: AR.2.58
CLUSTER: AR.2.96
CLUSTER: AR.2.98
CLUSTER: AR.3.127
CLUSTER: AR.3.145
CLUSTER: AR.3.18
CLUSTER: AR.3.44
CLUSTER: AR.3.77
CLUSTER: AR.4.29
CLUSTER: AR.4.9