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Information on SUBCLASS 3.4.2
Subclass Accession number: 1715
Subclass: 3.4.2 PSSM
Type: AR beta-beta link
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 21

Average sequence ID (%) : 7.8 +/- 11.2
Average RMSD (Å) : 0.705 +/- 0.225

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 45-90 rho (°): 90-135
Consensus Sequence: hpXXpXX
(φψ)-conformation: bbaaabb
Pattern: x[cfgilmvw][deknprs]xx[cdhknqstwy]xxx
Conservation:-0.8290.2870.9360.348-0.1270.5751.336-1.939-0.587
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b7g_O_2781b7g   O279287MIFSDSIYVEEEGGG-EEbxxaaaxbb
1dpt_A_951dpt   A101109PLESWQIGKEE-GGG-EExbbaaabxb
1dyp_A_671dyp   A6876SWKNENATVEE-GGGEEEbxbaaabbb
1f0l_A_4411f0l   A442450DVNKSKTHIEE-TTT-EEbxxaaaxbb
1g41_A_2961g41   A297305MVKTDHILFEEE-TT-EExbxaaaxxb
1gv9_A_511gv9   A5361RFEYKYSFKEE-GGG-EEbxbaaabbb
1hh1_A_971hh1   A99107FIPFEKLRREEEGGGSEEbbpaaaxbx
1j48_A_401j48   A4250ACNPATATSEE-TTT-EEbbxaaaxbb
1l5p_A_741l5p   A7482ARLACAITLEEEGGG-EExbxaaabxx
1l6p_A_391l6p   A4048YLYRKQIRIEEEGGG-EEbxxaaaxbb
1lns_A_7441lns   A746754EIDLSQSKLEEEGGG-EEbbxaaabbb
1mdb_A_4231mdb   A426434EGRAKDQINEEEGGG-EEaexaaaxbb
1mww_A_971mww   A103111EQPAHCWGFEE-GGG-EEbbwaaabbb
1o4y_A_791o4y   A8088IFNAPQAWTEE-GGGEEEbpbaaabbb
1o89_A_1011o89   A103111RVKGDWLVAEE-GGG-EEbbxaaaxbp
1obf_O_2941obf   O295303TVDASLTKVEEEGGG-EEbxxaaaxbb
1otf_A_401otf   A4553EMPKNHFGIEE-GGG-EExbxaaabbb
1p2z_A_931p2z   A93100.LDMASTYF.EEGGGEEE.bxaaabbx
1s0y_A_401s0y   A4553EGSGINFVEEE-GGG-EEbbxaaabbb
1v3e_A_2991v3e   A303311RFKNNNISFEE-GGGSEExbxaaabxx
2mcm_*_432mcm   -4553GCDATTSTDEEETTT-EEbbxaaaxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dyp_A_671dyp   A     CDCADMIUM ION E - 72
1f0l_A_4411f0l   A     APUADENYLYL-3'-5'-PHOSPHO-URIDINE-3'-MONOPHOSPHATE K - 445
1f0l_A_4411f0l   A     APUADENYLYL-3'-5'-PHOSPHO-URIDINE-3'-MONOPHOSPHATE S - 446
1g41_A_2961g41   A     ADPADENOSINE-5'-DIPHOSPHATE S - 308
1l5p_A_741l5p   A     FESFE2/S2 (INORGANIC) CLUSTER L - 76
1l5p_A_741l5p   A     FESFE2/S2 (INORGANIC) CLUSTER A - 77
1l5p_A_741l5p   A     FESFE2/S2 (INORGANIC) CLUSTER C - 78
1l5p_A_741l5p   A     FESFE2/S2 (INORGANIC) CLUSTER A - 79
1mdb_A_4231mdb   A     AMPADENOSINE MONOPHOSPHATE V - 425
1mdb_A_4231mdb   A     AMPADENOSINE MONOPHOSPHATE G - 427
1mdb_A_4231mdb   A     AMPADENOSINE MONOPHOSPHATE R - 428
1mww_A_971mww   A     GLUGLUTAMIC ACID E - 98
1p2z_A_931p2z   A     CITCITRIC ACID D - 94
1p2z_A_931p2z   A     CITCITRIC ACID M - 95
1p2z_A_931p2z   A     CITCITRIC ACID A - 96
1s0y_A_401s0y   A     MLAMALONIC ACID F - 40
1s0y_A_401s0y   A     MLAMALONIC ACID F - 51
1s0y_A_401s0y   A     MLAMALONIC ACID E - 53
1v3e_A_2991v3e   A     NAGN-ACETYL-D-GLUCOSAMINE T - 302
1v3e_A_2991v3e   A     NAGN-ACETYL-D-GLUCOSAMINE R - 303
1v3e_A_2991v3e   A     NAGN-ACETYL-D-GLUCOSAMINE F - 304
1v3e_A_2991v3e   A     NAGN-ACETYL-D-GLUCOSAMINE K - 305
1v3e_A_2991v3e   A     NAGN-ACETYL-D-GLUCOSAMINE N - 307
1v3e_A_2991v3e   A     NAGN-ACETYL-D-GLUCOSAMINE N - 308
2mcm_*_432mcm   *     MPD2-METHYL-2,4-PENTANEDIOL I - 44
2mcm_*_432mcm   *     MPD2-METHYL-2,4-PENTANEDIOL C - 46
2mcm_*_432mcm   *     MPD2-METHYL-2,4-PENTANEDIOL T - 49
2mcm_*_432mcm   *     MPD2-METHYL-2,4-PENTANEDIOL T - 50
2mcm_*_432mcm   *     MPD2-METHYL-2,4-PENTANEDIOL S - 51
2mcm_*_432mcm   *     MPD2-METHYL-2,4-PENTANEDIOL T - 52
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1f0l_A_4411f0l   A CATREFERS TO CATALYTIC SITES - 446

Clusters included in this Subclass
CLUSTER: AR.3.137
CLUSTER: AR.3.91
CLUSTER: AR.4.196
CLUSTER: AR.4.41
CLUSTER: AR.5.16
CLUSTER: AR.5.78
CLUSTER: AR.6.62