Information on SUBCLASS 3.6.3 |
Subclass Accession number: 1732
Subclass: 3.6.3 Type: AR beta-beta link DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 14 Average sequence ID (%) : 19.3 +/- 19.4 Average RMSD (Å) : 0.693 +/- 0.194 Consensus geometry
|
Consensus Sequence: | XhXXcXX |
(φψ)-conformation: | bbppgbb |
Pattern: | [CFILTVY] | x | [CIL] | [knprt] | [DEKPRST] | [DEGNST] | x | [ehrstwy] | [hilvy] | x |
Conservation: | -0.097 | -0.960 | 2.234 | -0.218 | -0.060 | 0.683 | -0.807 | -0.939 | 0.165 | -1.000 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bhe_*_57 | 1bhe | - | 57 | 66 | LSLPSGVSLL | EE--TT-EEE | bbxxxvbbbb |
1e2w_A_70 | 1e2w | A | 75 | 83 | LILPEGFEL. | EE--TT-EE. | bbxxpgxbx. |
1f42_A_273 | 1f42 | A | 276 | 285 | VICRKNASIS | EE--TT-EEE | bbxbpvxbxb |
1fye_A_186 | 1fye | A | 188 | 197 | IGLPEGNWIQ | EE--TT-EEE | bxxxpvbbbb |
1g40_A_91 | 1g40 | A | 91 | 99 | YSCNSGYHL. | EE--TT-EE. | xxbxpGpbx. |
1gui_A_63 | 1gui | A | 69 | 78 | IGLYRGKTYT | EE--TT-EEE | bxbxpvbxbb |
1ijq_A_673 | 1ijq | A | 675 | 683 | CACPDGMLL. | EE--TT-EE. | xbbppvbbx. |
1kzq_A_29 | 1kzq | A | 32 | 41 | LKCPKTALTE | EE--TT-EEE | bbbxxvxbxb |
1lml_*_533 | 1lml | - | 533 | 542 | TNCTPGLRVE | EE--TT-EEE | bpbxpgxbbx |
1nzi_A_138 | 1nzi | A | 141 | 149 | CSCPPEYFL. | EE--TT-EE. | bbbxpvbbx. |
1o59_A_135 | 1o59 | A | 141 | 150 | FECGPSQRHL | EE--TT-EEE | bxbbxlbxbb |
1uzp_A_1509 | 1uzp | A | 1511 | 1519 | CDCPPDFEL. | EE--TT-EE. | bxxxpvbbx. |
1uzp_A_1628 | 1uzp | A | 1631 | 1640 | CRCPTGYYLN | EE--TT--EE | bbxxpvbbxx |
2sak_*_38 | 2sak | - | 47 | 55 | FPIKPGTTL. | EE--TT-EE. | bxbbpgxxx. |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1e2w_A_70 | 1e2w | A | HECHEME C | N - 70 |
1e2w_A_70 | 1e2w | A | HECHEME C | V - 71 |
1e2w_A_70 | 1e2w | A | HECHEME C | G - 72 |
1e2w_A_70 | 1e2w | A | HECHEME C | M - 73 |
1e2w_A_70 | 1e2w | A | HECHEME C | V - 74 |
1f42_A_273 | 1f42 | A | MNB5-MERCAPTO-2-NITRO-BENZOIC ACID | S - 285 |
1f42_A_273 | 1f42 | A | MNB5-MERCAPTO-2-NITRO-BENZOIC ACID | R - 287 |
1gui_A_63 | 1gui | A | BGCBETA-D-GLUCOSE | Q - 64 |
1gui_A_63 | 1gui | A | BGCBETA-D-GLUCOSE | N - 66 |
1gui_A_63 | 1gui | A | GOLGLYCEROL | K - 82 |
1gui_A_63 | 1gui | A | GOLGLYCEROL | K - 84 |
1nzi_A_138 | 1nzi | A | CACALCIUM ION | G - 138 |
1nzi_A_138 | 1nzi | A | CACALCIUM ION | Y - 139 |
1o59_A_135 | 1o59 | A | MSESELENOMETHIONINE | I - 137 |
1o59_A_135 | 1o59 | A | MSESELENOMETHIONINE | V - 138 |
1o59_A_135 | 1o59 | A | MSESELENOMETHIONINE | E - 139 |
1o59_A_135 | 1o59 | A | MSESELENOMETHIONINE | F - 141 |
1o59_A_135 | 1o59 | A | MSESELENOMETHIONINE | F - 151 |
1o59_A_135 | 1o59 | A | MSESELENOMETHIONINE | V - 152 |
1uzp_A_1509 | 1uzp | A | SMSAMARIUM (III) ION | Y - 1509 |
1uzp_A_1628 | 1uzp | A | SMSAMARIUM (III) ION | S - 1628 |
1uzp_A_1628 | 1uzp | A | SMSAMARIUM (III) ION | F - 1629 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1e2w_A_70 | 1e2w | A | AC1HEC BINDING SITE FOR CHAIN A | N - 70 |
1e2w_A_70 | 1e2w | A | AC1HEC BINDING SITE FOR CHAIN A | G - 72 |
1gui_A_63 | 1gui | A | AC9BGC BINDING SITE FOR CHAIN A | Q - 64 |
1gui_A_63 | 1gui | A | AC9BGC BINDING SITE FOR CHAIN A | N - 66 |
1gui_A_63 | 1gui | A | AC4GOL BINDING SITE FOR CHAIN A | K - 82 |
1gui_A_63 | 1gui | A | AC3GOL BINDING SITE FOR CHAIN A | K - 84 |
1lml_*_533 | 1lml | * | CA3CARBOHYDRATE BINDING SITE. | N - 534 |
1uzp_A_1628 | 1uzp | A | AC2SM BINDING SITE FOR CHAIN A | S - 1628 |
Clusters included in this Subclass |
CLUSTER: AR.4.44 |
CLUSTER: AR.5.27 |
CLUSTER: AR.6.7 |