Information on SUBCLASS 2.8.6 |
Subclass Accession number: 176
Subclass: 2.8.6 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0000287 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 1.9 +/- 3.9 Average RMSD (Å) : 0.833 +/- 0.231 Consensus geometry
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Consensus Sequence: | pphXXX |
(φψ)-conformation: | aappbb |
Pattern: | [AGP] | x | [FIK] | x | [AEM] | [FIK] | x | [KRT] | [HNQ] | [CLV] | [EKP] | [FHW] | [IKL] | x | [AFV] | [AIY] | [ALY] | x |
Conservation: | 0.303 | 0.621 | -0.981 | -1.141 | -0.499 | -0.981 | -0.660 | 0.946 | 1.909 | 0.946 | 0.946 | 1.909 | -0.339 | -0.981 | -0.178 | -0.339 | -0.339 | -1.141 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1kkh_A_182 | 1kkh | A | 182 | 199 | GEFEEFLKNCKFLIVYAE | HHHHHHHHT--EEEEEEE | eaaaaaaaaxbbbxbxab |
2stv_*_13 | 2stv | - | 15 | 32 | AVKRMINTHLEHKRFALI | HHHHHHHTTS-EEEEEEE | aaaaaaaaaxxxxbbbbb |
3pvi_A_88 | 3pvi | A | 88 | 105 | PVIIAKYRQVPWIFAIYR | HHHHHHHHTS-EEEEEEE | aaaaaaaaabxbbbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
2stv_*_13 | 2stv | * | CACALCIUM ION | E - 25 |
2stv_*_13 | 2stv | * | CACALCIUM ION | K - 27 |
Clusters included in this Subclass |
CLUSTER: HE.4.87 |