Information on SUBCLASS 2.8.7 |
Subclass Accession number: 177
Subclass: 2.8.7 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 12.1 +/- 12.4 Average RMSD (Å) : 0.800 +/- 0.300 Consensus geometry
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Consensus Sequence: | XpXhXX |
(φψ)-conformation: | aappbb |
Pattern: | x | x | [KQ] | x | x | [HKN] | x | [FP] | [GIT] | x | x |
Conservation: | -0.128 | -0.489 | 2.020 | -0.910 | -1.330 | 0.982 | 0.587 | 0.840 | -0.910 | -0.279 | -0.384 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b35_A_45 | 1b35 | A | 45 | 55 | IRQLIKRFGIF | HHHHTTS-EEE | aaaaaaxxbxb |
1ek9_A_221 | 1ek9 | A | 239 | 249 | QAQDGHLPTLD | HHHGGGS-EEE | aaaaaaxxbbb |
1sw6_A_405 | 1sw6 | A | 419 | 429 | IVKKQNRPIQS | HHHGGG--EEE | aaaaaabxbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ek9_A_221 | 1ek9 | A | MSESELENOMETHIONINE | D - 242 |
1ek9_A_221 | 1ek9 | A | MSESELENOMETHIONINE | L - 245 |
1ek9_A_221 | 1ek9 | A | MSESELENOMETHIONINE | P - 246 |
1ek9_A_221 | 1ek9 | A | MSESELENOMETHIONINE | G - 255 |
1ek9_A_221 | 1ek9 | A | MSESELENOMETHIONINE | I - 256 |
1ek9_A_221 | 1ek9 | A | MSESELENOMETHIONINE | S - 257 |
Clusters included in this Subclass |
CLUSTER: HE.4.225 |