Home

Classification

Query

Statistics

Contact

Links

Help

PDB code:

Information on SUBCLASS 4.6.1

Subclass Accession number: 1808 Subclass: 4.6.1 Type: AR beta-beta link DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2.4 (>75 %)

Number of loops: 28 Average sequence ID (%) : 12.2 +/- 14.8 Average RMSD (Å) : 0.629 +/- 0.194 Consensus geometry d (Å): 7 delta (°): 45-90 theta (°): 135-180 rho (°): 0-45

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1acc_*_106	1acc	-	106	115	IRLEKGRLYQ	EEE-TT-EEE	bxbxxvbxbx
1aoz_A_206	1aoz	A	206	215	FHVSPKKTYR	EEE-TT-EEE	xbbxplbbbx
1aoz_A_254	1aoz	A	254	263	IDIYSGESYS	EEE-TT-EEE	bxbbpgxbbb
1aoz_A_419	1aoz	A	419	428	YQFKIGEVVD	EEE-TT-EEE	xbbxxgxxbb
1bdy_A_58	1bdy	A	61	70	AHIYEGRVIQ	EE--TT-EEE	bxxbxvxbbb
1bqk_*_22	1bqk	-	23	32	LKVAPGDTVT	EEE-TT-EEE	bbbxpvxbbb
1e30_A_63	1e30	A	64	73	LEIPAGATVD	EEE-TT-EEE	bbbxxvxxbx
1g5a_A_615	1g5a	A	615	624	LTLQPYQVMW	EEE-TT-EEE	bbxxpvxbbb
1gw0_A_216	1gw0	A	217	226	VTLTPGKRHR	EEE-TT-EEE	bbxxpvbxbx
1h03_P_92	1h03	P	95	104	YACNKGFTMI	EEE-TT-EEE	bbxxpvbbxb
1hfu_A_186	1hfu	A	187	196	VNVEQGKKYR	EEE-TT-EEE	bxbbpvxbbx
1hfu_A_235	1hfu	A	235	244	LQIFTGQRYS	EEE-TT-EEE	bbbxpvxbbx
1hx6_A_153	1hx6	A	153	161	.TIAAGATGE	.EE-TT-EEE	.bbxpvxbbb
1ji2_A_568	1ji2	A	571	580	LTLRPYQGMI	EEE-TT-EEE	bbbxplxbbb
1l4i_A_165	1l4i	A	165	174	TMVPPQGKVT	EEE-TT-EEE	bbbxpvbbbb
1m53_A_584	1m53	A	585	594	LSLSPWQAGV	EEE-TT-EEE	bxxxplxbbb
1mda_H_57	1mda	H	62	71	SLGAFLSLAV	EEE-TT-EEE	bbbFxlxbxb
1o6u_A_280	1o6u	A	282	291	VQISRGSSHQ	EEE-TT-EEE	bbbxpvbbbb
1ofn_A_48	1ofn	A	52	61	SMSKRGVVRG	EEE-TTBEEE	bbbxpvxbbe
1p2z_A_78	1p2z	A	85	94	LAVGDNRVLD	EEE-TT--EE	xxbxxlbbbx
1q8i_A_264	1q8i	A	266	275	FAQAKGRLII	EEEBTTBEEE	bxbbpvbxbb
1r75_A_92	1r75	A	97	106	VDVRPLETQM	EEE-TT-EEE	bbbxpvxbbx
1suu_A_651	1suu	A	655	664	EIVFKDEKVI	EEE-TT-EEE	bbbbpvxxbx
1tgo_A_248	1tgo	A	249	258	AVEVKGRIHF	EEE-TTSEEE	bxbbpgbbxx
1uzp_A_1509	1uzp	A	1511	1519	CDCPPDFEL.	EE--TT-EE.	bxxxpvbbx.
2bbk_H_57	2bbk	H	62	71	IDGGFLPNPV	EEE-SS-EEE	bxbFxlxbwb
2f5b_H_11	2f5b	H	11	19	.LVKPTQTLT	.EE-TTS-EE	.bbxpvxbbb
4ubp_B_74	4ubp	B	75	84	ARFEPGEEME	EEE-TT-EEE	bbbxpvxbbx

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1aoz_A_254	1aoz	A	CUCOPPER (II) ION	G - 259
1aoz_A_254	1aoz	A	C2OCU-O-CU LINKAGE	G - 259
1gw0_A_216	1gw0	A	NAGN-ACETYL-D-GLUCOSAMINE	N - 216
1gw0_A_216	1gw0	A	NAGN-ACETYL-D-GLUCOSAMINE	V - 217
1gw0_A_216	1gw0	A	NAGN-ACETYL-D-GLUCOSAMINE	T - 218
1gw0_A_216	1gw0	A	NAGN-ACETYL-D-GLUCOSAMINE	L - 227
1hfu_A_235	1hfu	A	CUCOPPER (II) ION	G - 240
1hx6_A_153	1hx6	A	MPD2-METHYL-2,4-PENTANEDIOL	W - 167
1o6u_A_280	1o6u	A	MSESELENOMETHIONINE	Q - 291
1ofn_A_48	1ofn	A	GOLGLYCEROL	T - 49
1ofn_A_48	1ofn	A	GOLGLYCEROL	I - 50
1ofn_A_48	1ofn	A	GOLGLYCEROL	H - 51
1p2z_A_78	1p2z	A	CITCITRIC ACID	D - 94
1uzp_A_1509	1uzp	A	SMSAMARIUM (III) ION	Y - 1509

PDB Site Annotated loops in this subclass

Loop	PDB	Chain	Site	Residue
1gw0_A_216	1gw0	A	BC6NAG BINDING SITE FOR CHAIN A	N - 216
1gw0_A_216	1gw0	A	BC6NAG BINDING SITE FOR CHAIN A	T - 218

Clusters included in this Subclass

CLUSTER: AR.5.3

For any comment or web-related incidence, send an email to the webmaster.