Information on SUBCLASS 4.6.1 |
Subclass Accession number: 1808
Subclass: 4.6.1 Type: AR beta-beta link DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2.4 (>75 %) |
Number of loops: 28 Average sequence ID (%) : 12.2 +/- 14.8 Average RMSD (Å) : 0.629 +/- 0.194 Consensus geometry
|
Consensus Sequence: | XhXXhXXh |
(φψ)-conformation: | bbpplpbb |
Pattern: | [acfilvy] | x | [cfgilv] | x | [dekpqrst] | [glwy] | [adegkqrs] | x | [agilmpvy] | x |
Conservation: | 0.870 | -0.812 | 1.026 | -1.127 | 0.611 | 0.993 | 0.773 | -0.042 | -0.563 | -1.728 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1acc_*_106 | 1acc | - | 106 | 115 | IRLEKGRLYQ | EEE-TT-EEE | bxbxxvbxbx |
1aoz_A_206 | 1aoz | A | 206 | 215 | FHVSPKKTYR | EEE-TT-EEE | xbbxplbbbx |
1aoz_A_254 | 1aoz | A | 254 | 263 | IDIYSGESYS | EEE-TT-EEE | bxbbpgxbbb |
1aoz_A_419 | 1aoz | A | 419 | 428 | YQFKIGEVVD | EEE-TT-EEE | xbbxxgxxbb |
1bdy_A_58 | 1bdy | A | 61 | 70 | AHIYEGRVIQ | EE--TT-EEE | bxxbxvxbbb |
1bqk_*_22 | 1bqk | - | 23 | 32 | LKVAPGDTVT | EEE-TT-EEE | bbbxpvxbbb |
1e30_A_63 | 1e30 | A | 64 | 73 | LEIPAGATVD | EEE-TT-EEE | bbbxxvxxbx |
1g5a_A_615 | 1g5a | A | 615 | 624 | LTLQPYQVMW | EEE-TT-EEE | bbxxpvxbbb |
1gw0_A_216 | 1gw0 | A | 217 | 226 | VTLTPGKRHR | EEE-TT-EEE | bbxxpvbxbx |
1h03_P_92 | 1h03 | P | 95 | 104 | YACNKGFTMI | EEE-TT-EEE | bbxxpvbbxb |
1hfu_A_186 | 1hfu | A | 187 | 196 | VNVEQGKKYR | EEE-TT-EEE | bxbbpvxbbx |
1hfu_A_235 | 1hfu | A | 235 | 244 | LQIFTGQRYS | EEE-TT-EEE | bbbxpvxbbx |
1hx6_A_153 | 1hx6 | A | 153 | 161 | .TIAAGATGE | .EE-TT-EEE | .bbxpvxbbb |
1ji2_A_568 | 1ji2 | A | 571 | 580 | LTLRPYQGMI | EEE-TT-EEE | bbbxplxbbb |
1l4i_A_165 | 1l4i | A | 165 | 174 | TMVPPQGKVT | EEE-TT-EEE | bbbxpvbbbb |
1m53_A_584 | 1m53 | A | 585 | 594 | LSLSPWQAGV | EEE-TT-EEE | bxxxplxbbb |
1mda_H_57 | 1mda | H | 62 | 71 | SLGAFLSLAV | EEE-TT-EEE | bbbFxlxbxb |
1o6u_A_280 | 1o6u | A | 282 | 291 | VQISRGSSHQ | EEE-TT-EEE | bbbxpvbbbb |
1ofn_A_48 | 1ofn | A | 52 | 61 | SMSKRGVVRG | EEE-TTBEEE | bbbxpvxbbe |
1p2z_A_78 | 1p2z | A | 85 | 94 | LAVGDNRVLD | EEE-TT--EE | xxbxxlbbbx |
1q8i_A_264 | 1q8i | A | 266 | 275 | FAQAKGRLII | EEEBTTBEEE | bxbbpvbxbb |
1r75_A_92 | 1r75 | A | 97 | 106 | VDVRPLETQM | EEE-TT-EEE | bbbxpvxbbx |
1suu_A_651 | 1suu | A | 655 | 664 | EIVFKDEKVI | EEE-TT-EEE | bbbbpvxxbx |
1tgo_A_248 | 1tgo | A | 249 | 258 | AVEVKGRIHF | EEE-TTSEEE | bxbbpgbbxx |
1uzp_A_1509 | 1uzp | A | 1511 | 1519 | CDCPPDFEL. | EE--TT-EE. | bxxxpvbbx. |
2bbk_H_57 | 2bbk | H | 62 | 71 | IDGGFLPNPV | EEE-SS-EEE | bxbFxlxbwb |
2f5b_H_11 | 2f5b | H | 11 | 19 | .LVKPTQTLT | .EE-TTS-EE | .bbxpvxbbb |
4ubp_B_74 | 4ubp | B | 75 | 84 | ARFEPGEEME | EEE-TT-EEE | bbbxpvxbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1aoz_A_254 | 1aoz | A | CUCOPPER (II) ION | G - 259 |
1aoz_A_254 | 1aoz | A | C2OCU-O-CU LINKAGE | G - 259 |
1gw0_A_216 | 1gw0 | A | NAGN-ACETYL-D-GLUCOSAMINE | N - 216 |
1gw0_A_216 | 1gw0 | A | NAGN-ACETYL-D-GLUCOSAMINE | V - 217 |
1gw0_A_216 | 1gw0 | A | NAGN-ACETYL-D-GLUCOSAMINE | T - 218 |
1gw0_A_216 | 1gw0 | A | NAGN-ACETYL-D-GLUCOSAMINE | L - 227 |
1hfu_A_235 | 1hfu | A | CUCOPPER (II) ION | G - 240 |
1hx6_A_153 | 1hx6 | A | MPD2-METHYL-2,4-PENTANEDIOL | W - 167 |
1o6u_A_280 | 1o6u | A | MSESELENOMETHIONINE | Q - 291 |
1ofn_A_48 | 1ofn | A | GOLGLYCEROL | T - 49 |
1ofn_A_48 | 1ofn | A | GOLGLYCEROL | I - 50 |
1ofn_A_48 | 1ofn | A | GOLGLYCEROL | H - 51 |
1p2z_A_78 | 1p2z | A | CITCITRIC ACID | D - 94 |
1uzp_A_1509 | 1uzp | A | SMSAMARIUM (III) ION | Y - 1509 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gw0_A_216 | 1gw0 | A | BC6NAG BINDING SITE FOR CHAIN A | N - 216 |
1gw0_A_216 | 1gw0 | A | BC6NAG BINDING SITE FOR CHAIN A | T - 218 |
Clusters included in this Subclass |
CLUSTER: AR.5.3 |