ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 5.4.1

Subclass Accession number: 181
Subclass: 5.4.1
Type: HH alpha-alpha
DB: ArchDB-KI

Number of loops: 3

Average sequence ID (%) : 42.0 +/- 0.2
Average RMSD (Å) : 0.68 +/- 0.27

Consensus geometry

d (Å): 13

delta (°): 135-180

theta (°): 90-135

rho (°): 180-225

Consensus Sequence:	hXppXYXXX
(φψ)-conformation:	aalppbpaa

Pattern:	[P]	[E]	[V]	[LV]	x	[QRT]	[KS]	x	[Y]	x	x	x	[IV]	[D]	[ILW]	[W]	[S]	[FLV]	[G]	[CI]	[ILM]	[AFI]	[AIY]	[E]	[M]	[FIL]	x
Conservation:	1.479	0.680	0.280	-0.292	-0.918	-0.740	-0.336	-0.740	1.479	-0.785	-0.829	-0.785	0.092	1.079	-0.740	3.076	0.280	-0.696	1.079	-0.364	-0.297	-0.962	-1.007	0.680	0.680	-0.519	-0.874

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1f3m_D_433	1f3m	D	433	459	PEVVTRKAYGPKVDIWSLGIMAIEMIE	HHHHTT----TTHHHHHHHHHHHHHHH	aaaaalxxbbaaaaaaaaaaaaaaaaa
1fot_A_251	1fot	A	251	277	PEVVSTKPYNKSIDWWSFGILIYEMLA	HHHHTT--B-TTHHHHHHHHHHHHHHH	aaaaalb-bxaaaaaaaaaaaaaaaaa
1g3n_A_188	1g3n	A	188	214	PEVLLQSSYATPVDLWSVGCIFAEMFR	HHHHTT----THHHHHHHHHHHHHHHH	aaaaalFxaxaaaaaaaaaaaaaaaaa

Clusters included in this Subclass