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Information on SUBCLASS 4.8.6
Subclass Accession number: 1818
Subclass: 4.8.6 PSSM
Type: AR beta-beta link
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0003676 (>50 %)  GO:0003723 (>50 %)  GO:0003729 (>50 %)  GO:0004872 (>50 %)  GO:0004888 (>50 %)  GO:0004930 (>50 %)  GO:0008248 (>50 %)  
SCOP : 50181 (>50 %)  50182 (>50 %)  50183 (>50 %)  63876 (>50 %)  63877 (>50 %)  63878 (>50 %)  
 Number of loops: 3

Average sequence ID (%) : 20.0 +/- 21.2
Average RMSD (Å) : 0.467 +/- 0.058

Consensus geometry
d (Å): 7 delta (°): 0-45 theta (°): 45-90 rho (°): 0-45
Consensus Sequence: XhXhXchX
(φψ)-conformation: bbpaaapa
Pattern: xxx[FL][EGQ][DQT][V]x[IV][PR][AG][CDE][KN][IM]x
Conservation:-0.818-1.100-1.0060.465-0.441-0.4411.817-1.0061.4180.1140.869-0.6301.1190.742-1.100
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1buc_A_2131buc   A215229ELVFQDVKVPAENMLEEEEEEEEE-GGGEExbbbbvxxbxaaaxb
1d3b_A_551d3b   A5569VAQLEQVYIRGCKIREEEEEEEEE-GGGEEbbbbabbbbxaaaxa
1mgq_A_611mgq   A6377TRRLGTVLIRGDNIVEEEEEEEEE-GGGEEabbaexbbbxaaaxa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1buc_A_2131buc   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 213
1d3b_A_551d3b   A     GOLGLYCEROL V - 55
1d3b_A_551d3b   A     GOLGLYCEROL I - 68
1d3b_A_551d3b   A     GOLGLYCEROL R - 69
1d3b_A_551d3b   A     GOLGLYCEROL I - 72

Clusters included in this Subclass
CLUSTER: AR.3.206