Information on SUBCLASS 4.40.1 |
Subclass Accession number: 1859
Subclass: 4.40.1 Type: AR beta-beta link DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation SCOP : 49749 (>50 %) 49753 (>50 %) 49841 (>75 %) 49842 (>75 %) 49843 (>75 %) 88632 (>50 %) |
Number of loops: 4 Average sequence ID (%) : 25.0 +/- 23.1 Average RMSD (Å) : 0.700 +/- 0.141 Consensus geometry
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Consensus Sequence: | hXhpXXcp |
(φψ)-conformation: | bbpabweb |
Pattern: | x | [FIV] | [KTV] | [CLV] | [DEKT] | [KV] | [PS] | [DG] | x | [VY] | [TY] | [FI] | [AT] | x |
Conservation: | -1.682 | 0.176 | -0.719 | 0.130 | -0.510 | -0.347 | 1.271 | 1.032 | -1.256 | 1.321 | 0.130 | 1.269 | 0.387 | -1.202 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1acc_*_62 | 1acc | - | 68 | 81 | FIKVKKSDEYTFAT | EEE-SS-EEEEEEE | bbbbabpebbbxbb |
1f35_A_63 | 1f35 | A | 69 | 82 | NVVLDKPGKVTITG | EEEESSSEEEEEEE | bbbbabpebbbbbx |
1o91_A_651 | 1o91 | A | 651 | 664 | IFTCEVPGVYYFAY | EEE--S-EEEEEEE | bbbxabwexbbbbb |
1pk6_A_128 | 1pk6 | A | 128 | 141 | RFVCTVPGYYYFTF | EEE--S-EEEEEEE | bxbxaxwexbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1f35_A_63 | 1f35 | A | MSESELENOMETHIONINE | L - 63 |
1f35_A_63 | 1f35 | A | MSESELENOMETHIONINE | V - 70 |
1f35_A_63 | 1f35 | A | MSESELENOMETHIONINE | V - 71 |
1f35_A_63 | 1f35 | A | MSESELENOMETHIONINE | L - 72 |
1f35_A_63 | 1f35 | A | MSESELENOMETHIONINE | G - 76 |
1f35_A_63 | 1f35 | A | MSESELENOMETHIONINE | V - 78 |
1f35_A_63 | 1f35 | A | MSESELENOMETHIONINE | G - 82 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1o91_A_651 | 1o91 | A | SO4SO4 BINDING SITE FOR CHAIN C | Y - 661 |
1o91_A_651 | 1o91 | A | SO4SO4 BINDING SITE FOR CHAIN C | A - 663 |
Clusters included in this Subclass |
CLUSTER: AR.3.118 |