Information on SUBCLASS 5.3.2 |
Subclass Accession number: 1873
Subclass: 5.3.2 Type: AR beta-beta link DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 14.2 +/- 17.0 Average RMSD (Å) : 0.800 +/- 0.122 Consensus geometry
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Consensus Sequence: | hphpXXpXX |
(φψ)-conformation: | bbppaaabb |
Pattern: | [ALVY] | [DNT] | [FLM] | [NPS] | [ADEGQ] | [AD] | [dns] | [hlv] | [GKRT] | [ktw] | x | x |
Conservation: | -0.384 | 1.267 | 1.574 | 0.695 | -0.632 | 0.787 | -0.398 | -1.408 | -0.782 | -0.720 | -1.000 | -1.000 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1amf_*_180 | 1amf | - | 184 | 195 | ATFPEDSHKKVE | EE--GGGS--EE | bbxxaaabppxb |
1fi4_A_34 | 1fi4 | A | 37 | 48 | VTLSQDDLRTLT | EEB-TTTS-EEE | bxxpaaabbbbb |
1gd0_A_94 | 1gd0 | A | 99 | 108 | YDMNAANVGW.. | EE--GGG-EE.. | bxxxaaabxb.. |
1hfo_A_94 | 1hfo | A | 99 | 108 | VNLNGDDVGW.. | EE--GGG-EE.. | bxxxaaabxb.. |
1k7w_A_273 | 1k7w | A | 273 | 283 | LTLSDAFSTGA. | EE--GGG-EEE. | bbxxaaabbbb. |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1amf_*_180 | 1amf | * | MOOMOLYBDATE ION | Y - 196 |
1fi4_A_34 | 1fi4 | A | MSESELENOMETHIONINE | S - 34 |
1fi4_A_34 | 1fi4 | A | MSESELENOMETHIONINE | I - 35 |
1fi4_A_34 | 1fi4 | A | MSESELENOMETHIONINE | V - 37 |
1gd0_A_94 | 1gd0 | A | CITCITRIC ACID | N - 97 |
1gd0_A_94 | 1gd0 | A | CITCITRIC ACID | Y - 99 |
1k7w_A_273 | 1k7w | A | AS1ARGININOSUCCINATE | T - 281 |
1k7w_A_273 | 1k7w | A | AS1ARGININOSUCCINATE | G - 282 |
1k7w_A_273 | 1k7w | A | AS1ARGININOSUCCINATE | A - 283 |
Clusters included in this Subclass |
CLUSTER: AR.7.18 |