ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 9.2.1

Subclass Accession number: 190
Subclass: 9.2.1
Type: HH alpha-alpha
DB: ArchDB-KI

Number of loops: 12

Average sequence ID (%) : 57.5 +/- 5.6
Average RMSD (Å) : 0.46 +/- 0.15

Consensus geometry

d (Å): 25

delta (°): 90-135

theta (°): 45-90

rho (°): 315-360

Consensus Sequence:	hppRhLFPGppph
(φψ)-conformation:	aalbpabwpabaa

Pattern:	{IV}	{D}	[ILW]	{W}	{S}	[GLV]	[CG]	[CM]	[FI]	[AFLM]	[AG]	[EM]	[ILM]	[FLV]	[RST]	{HKNR}	[EKR]	{AIP}	[FIL]	[F]	{PY}	[G]	[DHKRST]	[DHS]	[DEHNY]	{ILV}	[D]	[Q]	[LW]	x	{HKR}	[IV]	[AFIL]	{DEKR}	{ILTV}	[ILV]
Conservation:	-0.547	0.012	-0.448	1.493	-0.403	-0.894	0.211	1.424	0.191	-0.667	0.128	-0.047	0.356	-0.382	-0.474	-0.773	0.178	-0.857	-0.035	2.283	-0.663	2.283	-1.081	-0.263	-0.700	-0.645	2.283	1.681	-0.022	-1.557	-0.740	0.849	-0.668	-0.915	-0.876	0.283

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1a6o_*_213	1a6o	-	214	249	DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL	HHHHHHHHHHHHHHT-SSSS--SSHHHHHHHHHHHH	aaaaaaaaaaaaaalbb-abbxabaaaaaaaaaaaa
1aq1_*_183	1aq1	-	184	219	VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL	HHHHHHHHHHHHHHHSS-SS--SSHHHHHHHHHHHH	aaaaaaaaaaaaaaavbpab-xabaaaaaaaaaaaa
1b38_A_183	1b38	A	184	219	VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL	HHHHHHHHHHHHHHHSS-S---SSHHHHHHHHHHHH	aaaaaaaaaaaaaaavbpab-xabaaaaaaaaaaaa
1blx_A_199	1blx	A	200	235	VDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVI	HHHHHHHHHHHHHHHSS-S---SSHHHHHHHHHHHH	aaaaaaaaaaaaaaalbpabbxabaaaaaaaaaaaa
1ckp_*_183	1ckp	-	184	219	VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL	HHHHHHHHHHHHHHHSS-S---SSHHHHHHHHHHHH	aaaaaaaaaaaaaaavbpab-xabaaaaaaaaaaaa
1erk_*_206	1erk	-	207	242	IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL	HHHHHHHHHHHHHHHSS-SS--SSHHHHHHHHHHHH	aaaaaaaaaaaaaaavbxab-xabaaaaaaaaaaaa
1hcl_*_183	1hcl	-	184	219	VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL	HHHHHHHHHHHHHHHSS-S---SSHHHHHHHHHHHH	aaaaaaaaaaaaaaavbxab-xabaaaaaaaaaaaa
1jsu_A_183	1jsu	A	184	219	VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL	HHHHHHHHHHHHHHHSS-S---SSHHHHHHHHHHHH	aaaaaaaaaaaaaaavbpab-xabaaaaaaaaaaaa
1p38_*_204	1p38	-	204	239	VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV	HHHHHHHHHHHHHHHSS-S---SSHHHHHHHHHHHH	aaaaaaaaaaaaaaavbxab-xabaaaaaaaaaaaa
1pme_*_208	1pme	-	209	244	IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL	HHHHHHHHHHHHHHHSS-S---SSHHHHHHHHHHHH	aaaaaaaaaaaaaaavbxab-xabaaaaaaaaaaaa
1wfc_*_203	1wfc	-	204	239	VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV	HHHHHHHHHHHHHHHSS-S---SSHHHHHHHHHHHH	aaaaaaaaaaaaaaavbpab-xabaaaaaaaaaaaa
1wfc_*_244	1wfc	-	244	279	VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL	HHHHHHHHHHHHHHHSS-SS--SSHHHHHHHHHHHH	aaaaaaaaaaaaaaavbpabxeabaaaaaaaaaaaa

Clusters included in this Subclass

CLUSTER: HH.9.4