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Information on SUBCLASS 3.1.8
Subclass Accession number: 190
Subclass: 3.1.8 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.7 (>75 %)  2.7.7 (>50 %)  2.7.7.7
GO : GO:0000287 (>50 %)  GO:0003677 (>50 %)  GO:0003887 (>50 %)  GO:0016772 (>75 %)  GO:0016779 (>50 %)  GO:0016829 (>50 %)  
SCOP : 81300 (>50 %)  81301 (>50 %)  81302 (>50 %)  
 Number of loops: 3

Average sequence ID (%) : 26.7 +/- 22.7
Average RMSD (Å) : 0.367 +/- 0.115

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XXGXXXX
(φψ)-conformation: aalpabb
Pattern: [AG][AS][FIY][AR][GR][G][ACK][AE]x[CSV]
Conservation:0.3690.1990.041-0.208-0.3202.552-0.796-0.093-0.872-0.872
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bpy_A_1791bpy   A179188GSFRRGAESSHHHHTT-SEEeaaaaUpabx
1pfk_A_1751pfk   A180189AAIAGGCEFVHHHHTT-SEEaaaaavxabb
1rzt_A_4161rzt   A416425GSYRRGKATCHHHHTT-SEEeaaaavxabb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bpy_A_1791bpy   A     DCT2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE G - 179
1bpy_A_1791bpy   A     MGMAGNESIUM ION G - 179
1bpy_A_1791bpy   A     DCT2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE S - 180
1bpy_A_1791bpy   A     MGMAGNESIUM ION S - 180
1bpy_A_1791bpy   A     DCT2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE F - 181
1bpy_A_1791bpy   A     MGMAGNESIUM ION F - 181
1bpy_A_1791bpy   A     DCT2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE R - 183
1bpy_A_1791bpy   A     DCT2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE S - 187
1bpy_A_1791bpy   A     DCT2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE S - 188
1bpy_A_1791bpy   A     MGMAGNESIUM ION S - 188
1pfk_A_1751pfk   A     ADPADENOSINE-5'-DIPHOSPHATE G - 184
1pfk_A_1751pfk   A     MGMAGNESIUM ION G - 184
1pfk_A_1751pfk   A     ADPADENOSINE-5'-DIPHOSPHATE G - 185
1pfk_A_1751pfk   A     MGMAGNESIUM ION G - 185
1pfk_A_1751pfk   A     ADPADENOSINE-5'-DIPHOSPHATE C - 186
1pfk_A_1751pfk   A     MGMAGNESIUM ION C - 186
1pfk_A_1751pfk   A     ADPADENOSINE-5'-DIPHOSPHATE E - 187
1pfk_A_1751pfk   A     MGMAGNESIUM ION E - 187

Clusters included in this Subclass
CLUSTER: HE.5.201