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Information on SUBCLASS 6.8.1
Subclass Accession number: 1939
Subclass: 6.8.1 PSSM
Type: AR beta-beta link
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 3.1 (>75 %)  3.1.1 (>75 %)  3.1.1.3
GO : GO:0004091 (>75 %)  GO:0004771 (>75 %)  GO:0005529 (>75 %)  GO:0016788 (>75 %)  GO:0016789 (>75 %)  GO:0030246 (>75 %)  
SCOP : 49898 (>75 %)  49899 (>75 %)  49900 (>75 %)  53473 (>75 %)  53474 (>75 %)  53475 (>75 %)  
 Number of loops: 5

Average sequence ID (%) : 10.0 +/- 12.1
Average RMSD (Å) : 0.860 +/- 0.477

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XhpNXppXXh
(φψ)-conformation: bbabaapabb
Pattern: x[knr][cftv][ikl][ilv][dkt][DN][eps][DKQR][DNQY][knpr]x[eflm]
Conservation:-0.8400.145-0.708-0.4990.448-0.4462.905-0.3150.7170.222-0.741-0.642-0.246
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1amx_*_2731amx   -279291YKTKITNEQQKEFEEEEES-TT--EEbbbxxabaaxabb
1cfb_*_7631cfb   -763775ENNNIFDWRQNNIEEEEE--TT--EEbbbxbaxaaxabb
1fo0_B_191fo0   B2133LRCILKNSQYPWMEEEEES-TT--EEbbbbxabaabaxb
1ohl_A_411ohl   A4456PLFISDNPDDFTEEEEEESSTT-EEExbbxxabaaxaxx
1qg3_A_12711qg3   A12711283KKVLVDNPKNRMLEEEEE--TT--EEbbbxbabaaxabb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ohl_A_411ohl   A     PBG3-[5-(AMINOMETHYL)-4-(CARBOXYMETHYL)-1H-PYRROL-3-YL] PROPANOIC ACID F - 46
1qg3_A_12711qg3   A     CACCACODYLATE ION K - 1271
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1amx_*_2731amx   * CBRCOLLAGEN-BINDING RESIDUES IDENTIFIED BY SITE-DIRECTED MUTAGENESIS.N - 278

Clusters included in this Subclass
CLUSTER: AR.6.37
CLUSTER: AR.7.36