Information on SUBCLASS 6.27.1 |
Subclass Accession number: 1958
Subclass: 6.27.1 Type: AR beta-beta link DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 4.2 (>75 %) 4.2.1 (>75 %) 4.2.1.1 GO : GO:0004089 (>75 %) GO:0004553 (>50 %) GO:0008270 (>75 %) GO:0016798 (>50 %) GO:0016829 (>75 %) GO:0016835 (>75 %) GO:0016836 (>75 %) GO:0030246 (>50 %) SCOP : 49784 (>50 %) 49785 (>50 %) 51068 (>75 %) 51069 (>75 %) 51070 (>75 %) 69213 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 15.4 +/- 17.8 Average RMSD (Å) : 0.500 +/- 0.200 Consensus geometry
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Consensus Sequence: | hXphXXGpXX |
(φψ)-conformation: | bblpbpgpbb |
Pattern: | x | x | [FIV] | [GT] | [KY] | [IL] | [DEG] | [AKN] | [G] | [DSY] | [RSW] | [ILT] | [AST] |
Conservation: | -0.858 | -1.080 | 0.103 | 0.201 | 0.468 | 0.815 | -0.119 | -0.562 | 2.764 | -0.710 | -0.784 | -0.267 | 0.029 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1od3_A_52 | 1od3 | A | 52 | 64 | SAIGYIENGYSTT | EEEE---TT-EEE | bbxblxbpvxbbb |
1tyv_*_177 | 1tyv | - | 179 | 191 | LIFTKLGKGSRIA | EEEE---TT-EEE | bbbblxxpgxbbb |
1uxz_A_29 | 1uxz | A | 29 | 41 | KNVGYIDAGDWLS | EEEE---TT-EEE | bbxblxbpgxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1od3_A_52 | 1od3 | A | CACALCIUM ION | S - 52 |
1od3_A_52 | 1od3 | A | CACALCIUM ION | A - 53 |
1od3_A_52 | 1od3 | A | BGCBETA-D-GLUCOSE | I - 54 |
1od3_A_52 | 1od3 | A | BGCBETA-D-GLUCOSE | G - 55 |
1od3_A_52 | 1od3 | A | BGCBETA-D-GLUCOSE | Y - 56 |
1od3_A_52 | 1od3 | A | BGCBETA-D-GLUCOSE | I - 57 |
1od3_A_52 | 1od3 | A | BGCBETA-D-GLUCOSE | E - 58 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1od3_A_52 | 1od3 | A | AC4CA BINDING SITE FOR CHAIN A | S - 52 |
1od3_A_52 | 1od3 | A | AC2BGC BINDING SITE FOR CHAIN A | G - 55 |
1od3_A_52 | 1od3 | A | AC2BGC BINDING SITE FOR CHAIN A | Y - 56 |
Clusters included in this Subclass |
CLUSTER: AR.5.134 |