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Information on SUBCLASS 3.2.5
Subclass Accession number: 197
Subclass: 3.2.5 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : - (>75 %)  
Number of loops: 11

Average sequence ID (%) : 14.2 +/- 14.4
Average RMSD (Å) : 0.600 +/- 0.134

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: XXcXXhh
(φψ)-conformation: aalppbb
Pattern: x[aegrt]xxx[GKNR][klv][knprs][CFGILTV][cfiltvy]x
Conservation:-0.691-0.368-0.749-0.608-1.2412.2310.2000.8880.3310.006-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cb0_A_1461cb0   A155164TAKKLGLRCH.HHHHTT--EE.aaaaavxxbx.
1d1l_A_281d1l   A3242KAIHAGRKIFLHHHHTT--EEEaaaaalxxbbb
1g6o_A_1571g6o   A166176DGIAIGKNVIVHHHHHT--EEEaaaaavbxbbb
1gzs_B_1381gzs   B147157AAKNAGLPGTTHHHHTT--EEEaaaaavxxbbb
1hss_A_951hss   A95104ITAVCRLPIV.HHHHTT--EE.aaaaalbxbb.
1jzt_A_1001jzt   A108117QLNFFKVPVL.HHHHTT--EE.aaaaalxpbx.
1m66_A_1571m66   A158168IEVATGVFTCVHHHHTT--EEEaaaaavxpbbb
1m7v_A_2721m7v   A287296SYKKQGVSIV.HHHHHT--EE.aaaaavbpbb.
1psw_A_2751psw   A275285VAAALNRPLVAHHHHTT--EEEaaaaavxwbbb
1r6t_A_1451r6t   A148158DAYENKKPFYLHHHHTT--EEEaaaaavxwbbx
1r9l_A_1661r9l   A175185SRYKEGKPVFYHHHHTT---EEaaaaavxxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1g6o_A_1571g6o   A     MSESELENOMETHIONINE A - 163
1g6o_A_1571g6o   A     MSESELENOMETHIONINE I - 164
1g6o_A_1571g6o   A     MSESELENOMETHIONINE G - 167
1g6o_A_1571g6o   A     MSESELENOMETHIONINE I - 168
1g6o_A_1571g6o   A     MSESELENOMETHIONINE K - 172
1g6o_A_1571g6o   A     MSESELENOMETHIONINE N - 173
1g6o_A_1571g6o   A     MSESELENOMETHIONINE V - 174
1g6o_A_1571g6o   A     MSESELENOMETHIONINE I - 175
1g6o_A_1571g6o   A     MSESELENOMETHIONINE V - 176
1g6o_A_1571g6o   A     ADPADENOSINE-5'-DIPHOSPHATE G - 178
1jzt_A_1001jzt   A     MSESELENOMETHIONINE F - 101
1jzt_A_1001jzt   A     MSESELENOMETHIONINE Y - 102
1jzt_A_1001jzt   A     MSESELENOMETHIONINE L - 105
1m7v_A_2721m7v   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 296
1psw_A_2751psw   A     MSESELENOMETHIONINE V - 275
1psw_A_2751psw   A     MSESELENOMETHIONINE A - 276
1psw_A_2751psw   A     MSESELENOMETHIONINE A - 277
1psw_A_2751psw   A     MSESELENOMETHIONINE A - 278
1psw_A_2751psw   A     MSESELENOMETHIONINE L - 283
1psw_A_2751psw   A     MSESELENOMETHIONINE A - 285
1psw_A_2751psw   A     MSESELENOMETHIONINE Y - 287
1r6t_A_1451r6t   A     MSESELENOMETHIONINE Q - 145
1r6t_A_1451r6t   A     MSESELENOMETHIONINE V - 146
1r6t_A_1451r6t   A     MSESELENOMETHIONINE L - 147
1r6t_A_1451r6t   A     MSESELENOMETHIONINE D - 148
1r6t_A_1451r6t   A     TYMTRYPTOPHANYL-5'AMP Y - 159
1r6t_A_1451r6t   A     TYMTRYPTOPHANYL-5'AMP T - 160
1r9l_A_1661r9l   A     BETTRIMETHYL GLYCINE Y - 186
1r9l_A_1661r9l   A     BETTRIMETHYL GLYCINE W - 188

Clusters included in this Subclass
CLUSTER: HE.3.64
CLUSTER: HE.4.49
CLUSTER: HE.5.96