ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 7.18.1

Subclass Accession number: 1979
Subclass: 7.18.1

Type: AR beta-beta link
DB: ArchDB40

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 1 (>75 %)
GO : GO:0003779 (>75 %)  GO:0005515 (>75 %)  GO:0008092 (>75 %)
SCOP : 50997 (>75 %)  50998 (>75 %)  50999 (>75 %)  55752 (>75 %)  55753 (>75 %)  55754 (>75 %)

Number of loops: 2

Average sequence ID (%) : 63.2 +/- 0.0
Average RMSD (Å) : 0.300 +/- 0.000

Consensus geometry

d (Å): 15

delta (°): 90-135

theta (°): 135-180

rho (°): 45-90

Consensus Sequence:	XphpXWNGGTL
(φψ)-conformation:	pbabplpppbb

Pattern:	[K]	[A]	[A]	[W]	[KS]	[V]	[EP]	[HY]	[PV]	[ST]	[HP]	[W]	[N]	[G]	[G]	[T]	[L]	[ST]	[T]
Conservation:	0.093	-0.299	-0.299	2.440	-0.983	-0.299	-0.886	-0.005	-1.179	-0.788	-0.788	2.440	0.484	0.484	0.484	0.093	-0.299	-0.788	0.093

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1kb0_A_468	1kb0	A	468	486	KAAWSVEHVSPWNGGTLTT	EEEEEEEESSS----EEEE	bxabbbxbabxvxxxbbbb
1kv9_A_449	1kv9	A	449	467	KAAWKVPYPTHWNGGTLST	EEEEEEEESSS----EEEE	bxabbbxbabxvxxxbbbb

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1kb0_A_468	1kb0	A	GOLGLYCEROL	V - 473
1kb0_A_468	1kb0	A	GOLGLYCEROL	E - 474
1kb0_A_468	1kb0	A	GOLGLYCEROL	H - 475
1kb0_A_468	1kb0	A	GOLGLYCEROL	V - 476
1kb0_A_468	1kb0	A	PQQPYRROLOQUINOLINE QUINONE	W - 479
1kb0_A_468	1kb0	A	GOLGLYCEROL	N - 480
1kv9_A_449	1kv9	A	PQQPYRROLOQUINOLINE QUINONE	W - 460

Clusters included in this Subclass

CLUSTER: AR.8.25