Information on SUBCLASS 3.2.6 |
Subclass Accession number: 198
Subclass: 3.2.6 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 12.7 +/- 15.3 Average RMSD (Å) : 0.729 +/- 0.180 Consensus geometry
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Consensus Sequence: | pXchXhX |
(φψ)-conformation: | aalppbb |
Pattern: | x | [aekm] | x | [GILVW] | [chkqt] | [dkns] | [akrs] | [GKN] | [AIVY] | [KPQST] | [asv] | [aeqrt] |
Conservation: | -1.059 | -0.444 | -0.930 | -0.678 | -0.839 | 0.048 | 0.083 | 2.058 | 1.299 | 0.634 | 0.720 | -0.893 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1auo_A_173 | 1auo | A | 180 | 191 | FEHLKSRGVTVT | HHHHHTTT--EE | aaaaaaavxxbb |
1ig8_A_188 | 1ig8 | A | 193 | 204 | QKQITKRNIPIE | HHHHHHTT--EE | aaaaaaavxxbb |
1in0_A_104 | 1in0 | A | 111 | 122 | TKLVKDSKIKVQ | HHHHHHHT-SEE | aaaaaaavpxbb |
1j9j_A_108 | 1j9j | A | 113 | 124 | AMEGAMMNIPSI | HHHHHHTT--EE | aaaaaaalbwbb |
1nh8_A_69 | 1nh8 | A | 69 | 80 | RDLVCDSGAQVR | HHHHHHHT--EE | aaaaaaavxxbx |
1oyw_A_246 | 1oyw | A | 253 | 264 | AARLQSKGISAA | HHHHHHTT--EE | aaaaaaavxxbb |
1rtq_A_230 | 1rtq | A | 230 | 241 | HASWHNAGYPAA | HHHHHHTT--EE | aaaaaaavbwbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1j9j_A_108 | 1j9j | A | MGMAGNESIUM ION | T - 109 |
1nh8_A_69 | 1nh8 | A | AMPADENOSINE MONOPHOSPHATE | D - 70 |
1nh8_A_69 | 1nh8 | A | AMPADENOSINE MONOPHOSPHATE | L - 71 |
1oyw_A_246 | 1oyw | A | MSESELENOMETHIONINE | T - 252 |
1oyw_A_246 | 1oyw | A | MSESELENOMETHIONINE | R - 255 |
1oyw_A_246 | 1oyw | A | MSESELENOMETHIONINE | L - 256 |
1oyw_A_246 | 1oyw | A | MSESELENOMETHIONINE | K - 259 |
1oyw_A_246 | 1oyw | A | MSESELENOMETHIONINE | I - 261 |
Clusters included in this Subclass |
CLUSTER: HE.4.70 |