Information on SUBCLASS 3.2.7 |
Subclass Accession number: 199
Subclass: 3.2.7 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 10.5 +/- 13.0 Average RMSD (Å) : 0.757 +/- 0.355 Consensus geometry
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Consensus Sequence: | XhXhXXX |
(φψ)-conformation: | aalppbb |
Pattern: | [alm] | x | [agklv] | [AEGQS] | [ailw] | [aekst] | [acik] | [gly] | [DEGN] | [gilv] | [ADNP] | [gitv] | [aeknr] | [aimpv] |
Conservation: | 0.770 | -1.615 | -1.356 | 0.917 | -0.696 | -0.129 | -0.088 | -0.557 | 2.000 | -0.262 | 1.458 | 0.018 | -0.263 | -0.198 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ig8_A_188 | 1ig8 | A | 192 | 205 | LQKQITKRNIPIEV | HHHHHHHTT--EEE | aaaaaaaavxxbbx |
1iib_A_13 | 1iib | A | 23 | 36 | MRAQAEKYEVPVII | HHHHHHHTT--EEE | aaaaaaaalxxbbb |
1j0a_A_193 | 1j0a | A | 198 | 211 | LSLGLSILNEDIRP | HHHHHHHTT---EE | aaaaaaaalxxbxw |
1k20_A_14 | 1k20 | A | 24 | 37 | AYLAREAYGLDTEA | HHHHHHHH---EEE | aaaaaaaavxxxbx |
1lam_*_275 | 1lam | - | 283 | 296 | AIVSAAKLDLPINI | HHHHHHHTT-SSEE | aaaaaaaalxwbxb |
1qgi_A_96 | 1qgi | A | 96 | 109 | ADGALKRLGINGKM | HHHHHHHTT--EEE | aaaaaaaavxxbbx |
1vsr_A_127 | 1vsr | A | 133 | 146 | RLEEWICGEGASAQ | HHHHHHHTT--SEE | aaaaaaaalxxpbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1j0a_A_193 | 1j0a | A | PLPPYRIDOXAL-5'-PHOSPHATE | G - 193 |
1j0a_A_193 | 1j0a | A | PLPPYRIDOXAL-5'-PHOSPHATE | T - 194 |
1j0a_A_193 | 1j0a | A | PLPPYRIDOXAL-5'-PHOSPHATE | L - 195 |
1k20_A_14 | 1k20 | A | MNMANGANESE (II) ION | S - 14 |
1k20_A_14 | 1k20 | A | MNMANGANESE (II) ION | D - 15 |
1k20_A_14 | 1k20 | A | MNMANGANESE (II) ION | A - 16 |
1lam_*_275 | 1lam | * | MPD2-METHYL-2,4-PENTANEDIOL | N - 295 |
1lam_*_275 | 1lam | * | MPD2-METHYL-2,4-PENTANEDIOL | I - 296 |
1lam_*_275 | 1lam | * | MPD2-METHYL-2,4-PENTANEDIOL | V - 297 |
1lam_*_275 | 1lam | * | ZNZINC ION | N - 305 |
1vsr_A_127 | 1vsr | A | ZNZINC ION | D - 148 |
Clusters included in this Subclass |
CLUSTER: HE.3.91 |
CLUSTER: HE.4.82 |
CLUSTER: HE.5.48 |