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Information on SUBCLASS 8.13.1
Subclass Accession number: 1996
Subclass: 8.13.1 PSSM
Type: AR beta-beta link
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.2 (>50 %)  1.2.1 (>50 %)  1.2.1.123.6 (>50 %)  3.6.1 (>50 %)  3.6.1.23
GO : GO:0005529 (>75 %)  GO:0008943 (>50 %)  GO:0016462 (>75 %)  GO:0016620 (>50 %)  GO:0016817 (>75 %)  GO:0016818 (>75 %)  GO:0016903 (>50 %)  GO:0030246 (>75 %)  
SCOP : 49898 (>75 %)  49899 (>75 %)  49932 (>75 %)  51268 (>75 %)  51283 (>75 %)  51284 (>75 %)  51734 (>50 %)  51735 (>50 %)  51800 (>50 %)  
 Number of loops: 3

Average sequence ID (%) : 60.4 +/- -7.5
Average RMSD (Å) : 0.233 +/- 0.058

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: XIDXcYRGphcV
(φψ)-conformation: bbpaapapppbb
Pattern: [TV][I][D][AE][DG][Y][R][G][EN][IV][GK][V][AIV][LM][FI][N]
Conservation:-0.8890.1351.290-1.076-0.6921.8680.7131.290-0.597-0.148-1.0610.135-1.149-0.327-0.7841.290
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1f7d_A_691f7d   A6984VIDEGYRGEIGVIMINEE-TT--S--EEEEEEbbxaaxaxxxbbxbbx
1q5h_A_771q5h   A7792VIDEDYRGNVGVVLFNEE-TT--S--EEEEEExxxaaxaxpxbbxxbb
1six_A_801six   A8196TIDAGYRGEIKVALINEEETT--S--EEEEEEbbxaaxaxxxbbxxbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1q5h_A_771q5h   A     DUDDEOXYURIDINE-5'-DIPHOSPHATE V - 77
1q5h_A_771q5h   A     DUDDEOXYURIDINE-5'-DIPHOSPHATE I - 78
1q5h_A_771q5h   A     DUDDEOXYURIDINE-5'-DIPHOSPHATE D - 79
1q5h_A_771q5h   A     DUDDEOXYURIDINE-5'-DIPHOSPHATE D - 81
1q5h_A_771q5h   A     DUDDEOXYURIDINE-5'-DIPHOSPHATE Y - 82
1q5h_A_771q5h   A     DUDDEOXYURIDINE-5'-DIPHOSPHATE N - 85
1q5h_A_771q5h   A     DUDDEOXYURIDINE-5'-DIPHOSPHATE V - 86
1q5h_A_771q5h   A     DUDDEOXYURIDINE-5'-DIPHOSPHATE G - 87
1q5h_A_771q5h   A     DUDDEOXYURIDINE-5'-DIPHOSPHATE V - 88
1q5h_A_771q5h   A     DUDDEOXYURIDINE-5'-DIPHOSPHATE V - 89
1six_A_801six   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL I - 95

Clusters included in this Subclass
CLUSTER: AR.7.63