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Information on SUBCLASS 0.1.20
Subclass Accession number: 20
Subclass: 0.1.20 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 22.7 +/- 19.5
Average RMSD (Å) : 0.420 +/- 0.110

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: pphX
(φψ)-conformation: aabp
Pattern: [GIP][DEHKP][fl][A][EKQR]x[afk]x[TV][ILV][adv]
Conservation:-0.733-0.355-0.3092.0460.643-0.659-0.405-1.2370.6971.151-0.839
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1c4x_A_511c4x   A5262PDLAENFFVVAHHHHTTSEEEEaaaaaabxxbb
1ehy_A_461ehy   A5060GPLAEHYDVIVHHHHTTSEEEEaaaaaabxxbb
1j3v_A_181j3v   A1828GHLARRFPTLVHHHHTTS-EEEaaaaaabwbbb
1vhv_A_651vhv   A6979IERAKSKSVVLHHHHTTSEEEEaaaaaabxbbb
2dap_*_712dap   -7787PKFAQFACTVDHHHHTTSEEEEaaaaaabxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1j3v_A_181j3v   A     MSESELENOMETHIONINE G - 18
1j3v_A_181j3v   A     MSESELENOMETHIONINE H - 19
1j3v_A_181j3v   A     MSESELENOMETHIONINE L - 20
1j3v_A_181j3v   A     MSESELENOMETHIONINE A - 21
1j3v_A_181j3v   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE W - 29
1vhv_A_651vhv   A     MSESELENOMETHIONINE L - 80
1vhv_A_651vhv   A     MSESELENOMETHIONINE V - 81

Clusters included in this Subclass
CLUSTER: HE.2.70
CLUSTER: HE.4.95