Information on SUBCLASS 3.2.9 |
Subclass Accession number: 201
Subclass: 3.2.9 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 5.0 +/- 7.3 Average RMSD (Å) : 0.767 +/- 0.115 Consensus geometry
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Consensus Sequence: | hXchXXX |
(φψ)-conformation: | aalppbb |
Pattern: | x | [EGS] | [AKV] | [AL] | x | [EQS] | [ANV] | x | [ENY] | x | [ALV] | [KQR] | [AL] | x | [DG] | [GIL] | [KPQ] | x | [ITY] | [ALV] |
Conservation: | -0.199 | 0.089 | -0.488 | 0.785 | -0.921 | 1.099 | -0.921 | -1.065 | -0.055 | -0.921 | 0.233 | 1.820 | 0.785 | -1.354 | 2.253 | -1.209 | 0.666 | -0.488 | -0.344 | 0.233 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ewk_A_165 | 1ewk | A | 165 | 184 | SSVAIQVQNLLQLFDIPQIA | HHHHHHHHHHHGGGT--EEE | aaaaaaaaaaaaaalbxbbx |
1jnr_A_32 | 1jnr | A | 35 | 54 | CGAAYEAAYWAKLGGLKVTL | HHHHHHHHHHHTTTT--EEE | aaaaaaaaaaaaaalxxbbb |
1moq_*_523 | 1moq | - | 526 | 545 | LEKLKSNIEEVRARGGQLYV | HHHHHHHHHHTGGGT--EEE | aaaaaaaaaaaaaavxbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ewk_A_165 | 1ewk | A | GLUGLUTAMIC ACID | S - 165 |
1ewk_A_165 | 1ewk | A | GLUGLUTAMIC ACID | S - 166 |
1jnr_A_32 | 1jnr | A | FADFLAVIN-ADENINE DINUCLEOTIDE | F - 32 |
1jnr_A_32 | 1jnr | A | FADFLAVIN-ADENINE DINUCLEOTIDE | S - 33 |
1jnr_A_32 | 1jnr | A | FADFLAVIN-ADENINE DINUCLEOTIDE | G - 34 |
1jnr_A_32 | 1jnr | A | FADFLAVIN-ADENINE DINUCLEOTIDE | V - 55 |
1moq_*_523 | 1moq | * | MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID | A - 547 |
1moq_*_523 | 1moq | * | MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID | D - 548 |
Clusters included in this Subclass |
CLUSTER: HE.7.69 |