Information on SUBCLASS 10.8.1 |
Subclass Accession number: 2011
Subclass: 10.8.1 Type: AR beta-beta link DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : - (>50 %) 1.1 (>50 %) 1.1.1 (>50 %) 1.1.1.85 GO : GO:0003862 (>75 %) GO:0016614 (>75 %) GO:0016616 (>75 %) SCOP : 52171 (>75 %) 52317 (>75 %) 52325 (>50 %) 53658 (>75 %) 53659 (>75 %) 53660 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 28.9 +/- 16.8 Average RMSD (Å) : 0.633 +/- 0.153 Consensus geometry
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Consensus Sequence: | XXhXXhXXXphDAh |
(φψ)-conformation: | bpaaapbaaababb |
Pattern: | x | [PT] | [FL] | [AD] | [GKQ] | [AV] | [DNP] | [APS] | [AEL] | [ET] | [FLV] | [D] | [A] | [LV] | [IV] |
Conservation: | -1.186 | 0.150 | 0.480 | -0.552 | -0.803 | -0.097 | -0.419 | -0.573 | -1.339 | -0.030 | -0.496 | 2.571 | 1.191 | 0.235 | 0.869 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1g2i_A_52 | 1g2i | A | 52 | 66 | LTFDKVNPEEFDALV | EEGGG--GGG-SEEE | bxaaaxbaaababbb |
1p80_A_652 | 1p80 | A | 652 | 666 | ATFAGAPSLTVDAVI | EETTTS-GGG-SEEE | bxaaabpaaababbb |
1vhq_A_79 | 1vhq | A | 79 | 93 | RPLAQADAAELDALI | EEGGG--GGG-SEEE | bpaaaxbaaababbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1g2i_A_52 | 1g2i | A | MSESELENOMETHIONINE | P - 59 |
1g2i_A_52 | 1g2i | A | MSESELENOMETHIONINE | E - 60 |
1g2i_A_52 | 1g2i | A | MSESELENOMETHIONINE | F - 62 |
1g2i_A_52 | 1g2i | A | MSESELENOMETHIONINE | D - 63 |
1g2i_A_52 | 1g2i | A | MSESELENOMETHIONINE | A - 64 |
1g2i_A_52 | 1g2i | A | MSESELENOMETHIONINE | L - 65 |
1g2i_A_52 | 1g2i | A | MSESELENOMETHIONINE | V - 66 |
1vhq_A_79 | 1vhq | A | MSESELENOMETHIONINE | D - 85 |
1vhq_A_79 | 1vhq | A | MSESELENOMETHIONINE | A - 86 |
1vhq_A_79 | 1vhq | A | MSESELENOMETHIONINE | A - 87 |
1vhq_A_79 | 1vhq | A | MSESELENOMETHIONINE | L - 89 |
1vhq_A_79 | 1vhq | A | MSESELENOMETHIONINE | D - 90 |
1vhq_A_79 | 1vhq | A | MSESELENOMETHIONINE | A - 91 |
1vhq_A_79 | 1vhq | A | MSESELENOMETHIONINE | L - 92 |
1vhq_A_79 | 1vhq | A | MSESELENOMETHIONINE | I - 93 |
Clusters included in this Subclass |
CLUSTER: AR.9.18 |