Information on SUBCLASS 13.2.1 |
Subclass Accession number: 2017
Subclass: 13.2.1 Type: AR beta-beta link DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 3 (>50 %) 3 (>50 %) 5.3 (>50 %) 5.3.2 (>50 %) 5.3.2.1 GO : GO:0005102 (>50 %) GO:0005125 (>50 %) GO:0005549 (>75 %) GO:0016853 (>50 %) GO:0016853 (>75 %) GO:0016860 (>50 %) GO:0016860 (>75 %) GO:0016862 (>50 %) GO:0050178 (>50 %) SCOP : 50813 (>75 %) 50814 (>75 %) 50815 (>75 %) 55330 (>75 %) 55330 (>75 %) 55331 (>75 %) 55331 (>75 %) 55339 (>75 %) 55339 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 42.3 +/- 13.2 Average RMSD (Å) : 0.400 +/- 0.100 Consensus geometry
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Consensus Sequence: | hXXcXXhXhXGSppPhA |
(φψ)-conformation: | bbplppbbbllbappbb |
Pattern: | [AN] | [V] | [HT] | [IV] | x | [PT] | [DG] | x | x | [LM] | [AS] | [FL] | [GS] | [G] | [S] | [ST] | [EN] | [P] | [AC] | [A] | x | [CGL] | [ST] | [IL] | x | [S] |
Conservation: | -0.859 | 0.727 | -0.054 | 0.430 | -1.548 | 0.017 | -0.111 | -0.829 | -1.410 | 0.359 | -0.164 | -0.009 | -0.009 | 1.968 | 0.727 | 0.120 | -0.040 | 2.588 | 0.668 | 0.727 | -1.410 | -1.548 | -0.066 | 0.133 | -1.134 | 0.727 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dpt_A_38 | 1dpt | A | 38 | 63 | NVTVRPGLAMALSGSTEPCAQLSISS | EEEEE-S----BTTB-SS-EEEEEEE | bbbbbxvxbbbblvbaxpbbbbbbbb |
1gd0_A_38 | 1gd0 | A | 38 | 63 | AVHVVPDQLMAFGGSSEPCALCSLHS | EEEEE-S----BTTB-SS-EEEEEEE | bbbbbxlxxbbbvvbaxpbbbbbbbb |
1hfo_A_38 | 1hfo | A | 38 | 63 | AVHINTDQQLSFGGSTNPAAFGTLMS | EEEEE-S----BTTB-SS-EEEEEEE | bbbbbblxxbbblvbaxpbbbbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gd0_A_38 | 1gd0 | A | CITCITRIC ACID | H - 40 |
1gd0_A_38 | 1gd0 | A | CITCITRIC ACID | V - 42 |
1gd0_A_38 | 1gd0 | A | CITCITRIC ACID | M - 47 |
1gd0_A_38 | 1gd0 | A | CITCITRIC ACID | L - 58 |
1gd0_A_38 | 1gd0 | A | CITCITRIC ACID | C - 59 |
1gd0_A_38 | 1gd0 | A | CITCITRIC ACID | S - 60 |
1gd0_A_38 | 1gd0 | A | CITCITRIC ACID | H - 62 |
Clusters included in this Subclass |
CLUSTER: AR.13.2 |