Information on SUBCLASS 1.1.6 |
Subclass Accession number: 2030
Subclass: 1.1.6 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 26 Average sequence ID (%) : 11.6 +/- 13.5 Average RMSD (Å) : 0.527 +/- 0.203 Consensus geometry
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Consensus Sequence: | XXpXX |
(φψ)-conformation: | aapaa |
Pattern: | x | x | x | [afilv] | x | x | [cdehnqrst] | [dekpqrs] | x | x | x | x |
Conservation: | -1.069 | -0.627 | -0.542 | 2.502 | 0.368 | 0.484 | 0.078 | 0.636 | 0.490 | -0.862 | -0.521 | -0.937 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b8a_A_124 | 1b8a | A | 124 | 135 | RFMDLRRPEVMA | HHHHTTSHHHHH | aaaaaaxaaaaa |
1bgx_T_402 | 1bgx | T | 417 | 428 | WGRLEGEERLLW | HHHHTT-HHHHH | aaaaaabaaaaa |
1ehy_A_151 | 1ehy | A | 152 | 163 | YSQFHQLDMAVE | HHHHTT-HHHHH | aaaaaaxaaaaa |
1g2i_A_72 | 1g2i | A | 73 | 84 | PERVRLNEKAVS | HHHHTT-HHHHH | aaaaaaxaaaaa |
1hbn_B_413 | 1hbn | B | 416 | 426 | KEVFSQVDEFR. | HHHHTTSHHHH. | aaaaaaxaaaa. |
1iz0_A_244 | 1iz0 | A | 244 | 255 | LTPLLREGALVE | HHHHTT-HHHHH | aaaaaaxaaaaa |
1j9m_A_154 | 1j9m | A | 161 | 172 | ASSAMKNSTFRT | HHHHTTSHHHHH | aaaaaaxaaaaa |
1jdh_A_208 | 1jdh | A | 218 | 229 | LHNLSHHREGLL | HHHHTTSHHHHH | aaaaaabaaaaa |
1jdh_A_334 | 1jdh | A | 344 | 355 | LKVLSVCSSNKP | HHHHTTSTTHHH | aaaaaaxaaaaa |
1jdh_A_504 | 1jdh | A | 514 | 525 | IRNLALCPANHA | HHHHTTSGGGHH | aaaaaaxaaaaa |
1jdh_A_566 | 1jdh | A | 577 | 588 | LHILARDVHNRI | HHHHTTSHHHHH | aaaaaaxaaaaa |
1jdh_A_608 | 1jdh | A | 618 | 629 | LCELAQDKEAAE | HHHHTTSHHHHH | aaaaaabaaaaa |
1l0w_A_131 | 1l0w | A | 131 | 142 | RYLDLRRRRMQE | HHHHTTSHHHHH | aaaaaaxaaaaa |
1m8z_A_1033 | 1m8z | A | 1033 | 1044 | TEQLVQDQYGNY | HHHHTTSTTHHH | aaaaaaxaaaaa |
1m8z_A_1069 | 1m8z | A | 1069 | 1080 | VLVLSQHKFASN | HHHHHTSTTHHH | aaaaaaxaaaaa |
1m8z_A_997 | 1m8z | A | 997 | 1008 | VFALSTHPYGCR | HHHHHTSTTHHH | aaaaaabaaaaa |
1mdw_A_105 | 1mdw | A | 111 | 122 | IASLTLNEEILA | HHHHTT-HHHHH | aaaaaabaaaaa |
1nm8_A_235 | 1nm8 | A | 242 | 253 | YNTLIKDKVNRD | HHHHTTSHHHHH | aaaaaaxaaaaa |
1nrl_A_315 | 1nrl | A | 315 | 326 | FQQLLLEPMLKF | HHHHTTSHHHHH | aaaaaaxaaaaa |
1oj6_A_52 | 1oj6 | A | 52 | 63 | PEDSLSSPEFLD | HHHHTT-HHHHH | aaaaaaxaaaaa |
1pb7_A_180 | 1pb7 | A | 182 | 193 | DIYFRRQVELST | HHHHHT-GGGHH | aaaaaabaaaaa |
1poi_A_259 | 1poi | A | 265 | 276 | YDKVSKTQEDFD | HHHHTTSHHHHH | aaaaaabaaaaa |
1r5l_A_129 | 1r5l | A | 140 | 151 | SELIVQEVETQR | HHHHTTSHHHHH | aaaaaaxaaaaa |
1s29_A_47 | 1s29 | A | 47 | 57 | LETLLTFKRVN. | HHHHTTSHHHH. | aaaaaaxaaaa. |
1uuz_A_6 | 1uuz | A | 6 | 17 | LFELLGQPGYKA | HHHHTTSHHHHH | aaaaaaxaaaaa |
3mbp_*_305 | 3mbp | - | 308 | 319 | EEELAKDPRIAA | HHHHTTSHHHHH | aaaaaaxaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1oj6_A_52 | 1oj6 | A | AC1HEM BINDING SITE FOR CHAIN A | H - 64 |
1oj6_A_52 | 1oj6 | A | AC1HEM BINDING SITE FOR CHAIN A | K - 67 |
1oj6_A_52 | 1oj6 | A | AC2HEM BINDING SITE FOR CHAIN B | T - 77 |
Clusters included in this Subclass |
CLUSTER: HH.2.21 |
CLUSTER: HH.3.12 |
CLUSTER: HH.4.8 |
CLUSTER: HH.5.86 |