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Information on SUBCLASS 1.1.7
Subclass Accession number: 2031
Subclass: 1.1.7 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 23

Average sequence ID (%) : 10.9 +/- 13.6
Average RMSD (Å) : 0.552 +/- 0.195

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 45-90 rho (°): 180-225
Consensus Sequence: XXpXX
(φψ)-conformation: aapaa
Pattern: [adegkqst]x[cfikltv][agknqrst][dgknst]xx[afgilmwy]x
Conservation:-0.289-0.723-0.4630.0642.561-0.536-0.148-0.5470.082
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cxq_A_1241cxq   A124132SCFTSKSTRHHHHSHHHHaaaaxaaaa
1dbh_A_3891dbh   A389397KICSKSLAKHHHHSHHHHaaaapaaaa
1dpe_*_4131dpe   -417425ATEFSCAASHHHHSHHHHaaaaxaaaa
1ek9_A_2091ek9   A216224AEKRNLSLLHHHH-HHHHaaaaxaaaa
1elj_A_2771elj   A286294WLTTSEESIHHHH-HHHHaaaaxaaaa
1elj_A_3141elj   A315323EIKNDPVIYHHHT-HHHHaaaaxaaaa
1emu_A_2341emu   A237245SFLKSDIYLHHHTSHHHHaaaaxaaaa
1exb_A_2711exb   A275283DKILSEEGRHHHHSHHHHaaaaxaaaa
1fc4_A_2581fc4   A264272LRQRSRPYLHHHH-HHHHaaaaxaaaa
1fs7_A_2791fs7   A282290LYKTGIHGQHHHHSHHHHaaaaxaaaa
1g5a_A_171g5a   A2230GIEKSEDWRHHHHSHHHHaaaaxaaaa
1iat_A_21iat   A210ALTRDPQFQHHHH-HHHHaaaaxaaaa
1k3x_A_1151k3x   A115123QLTTHPFLQHHHHSHHHHaaaapaaaa
1m4j_A_1261m4j   A126134KEDVSLHGYHHHHSHHHHaaaaxaaaa
1mxr_A_1331mxr   A139147DIVTNEQIQHHHH-HHHHaaaaxaaaa
1nm8_A_5151nm8   A515523DIFMDTSYAHHHHSHHHHaaaaxaaaa
1nnf_A_2391nnf   A247255DFLASKKGQHHHHSHHHHaaaaxaaaa
1on3_A_2191on3   A220228DELGGAEAHHHHHSHHHHaaaaxaaaa
1qsa_A_3781qsa   A378386ALTQGPEMAHHHHSHHHHaaaaxaaaa
1s5p_A_721s5p   A7381EDVATPEGFHHHSSHHHHaaaabaaaa
1tca_*_2261tca   -226234GSLTSQFSYHHHHBHHHHaaaaxaaaa
1ub9_A_111ub9   A1119HILGNPVRLHHHHSHHHHaaaapaaaa
2ahj_A_1252ahj   A125133TWYKSFEYRHHHHSHHHHaaaaxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dbh_A_3891dbh   A     MSESELENOMETHIONINE K - 389
1dbh_A_3891dbh   A     MSESELENOMETHIONINE I - 390
1dbh_A_3891dbh   A     MSESELENOMETHIONINE C - 391
1dbh_A_3891dbh   A     MSESELENOMETHIONINE S - 392
1elj_A_2771elj   A     CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE D - 278
1elj_A_2771elj   A     CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE A - 279
1elj_A_2771elj   A     CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE K - 282
1elj_A_2771elj   A     CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE F - 283
1fc4_A_2581fc4   A     AKB2-AMINO-3-KETOBUTYRIC ACID L - 272
1fc4_A_2581fc4   A     MSESELENOMETHIONINE F - 273
1fc4_A_2581fc4   A     AKB2-AMINO-3-KETOBUTYRIC ACID F - 273
1fc4_A_2581fc4   A     PLPPYRIDOXAL-5'-PHOSPHATE F - 273
1fs7_A_2791fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE D - 279
1fs7_A_2791fs7   A     CACALCIUM ION D - 279
1fs7_A_2791fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE W - 280
1fs7_A_2791fs7   A     CACALCIUM ION W - 280
1fs7_A_2791fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE E - 281
1fs7_A_2791fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE Y - 283
1fs7_A_2791fs7   A     CACALCIUM ION Y - 283
1fs7_A_2791fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE K - 284
1fs7_A_2791fs7   A     ACTACETATE ION G - 286
1fs7_A_2791fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 287
1fs7_A_2791fs7   A     CACALCIUM ION I - 287
1fs7_A_2791fs7   A     ACTACETATE ION I - 287
1fs7_A_2791fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 288
1fs7_A_2791fs7   A     CACALCIUM ION H - 288
1fs7_A_2791fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE G - 289
1k3x_A_1151k3x   A     GOLGLYCEROL T - 117
1k3x_A_1151k3x   A     GOLGLYCEROL T - 118
1k3x_A_1151k3x   A     GOLGLYCEROL Q - 123
1k3x_A_1151k3x   A     GOLGLYCEROL R - 124
1qsa_A_3781qsa   A     ACTACETATE ION L - 391
1s5p_A_721s5p   A     ALYN(6)-ACETYLLYSINE A - 76
2ahj_A_1252ahj   A     CSD3-SULFINOALANINE Y - 127
2ahj_A_1252ahj   A     CEAS-HYDROXY-CYSTEINE Y - 127
2ahj_A_1252ahj   A     CSD3-SULFINOALANINE K - 128
2ahj_A_1252ahj   A     CSD3-SULFINOALANINE R - 133

Clusters included in this Subclass
CLUSTER: HH.0.36
CLUSTER: HH.1.26
CLUSTER: HH.1.72
CLUSTER: HH.2.27