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Information on SUBCLASS 1.1.10
Subclass Accession number: 2034
Subclass: 1.1.10 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 14

Average sequence ID (%) : 10.2 +/- 13.3
Average RMSD (Å) : 0.557 +/- 0.179

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 90-135 rho (°): 180-225
Consensus Sequence: XppXX
(φψ)-conformation: aapaa
Pattern: xxx[aflvw]x[cdkqrst][denqrs][ekpq][adepqst][afgilvw]x
Conservation:-1.7150.411-0.7130.1230.752-0.2071.0631.6650.281-1.278-0.382
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a3a_A_1111a3a   A118128LTNALDDESVIHHHHT-SHHHHaaaaaaxaaaa
1aui_B_391aui   B3949VEEFMSLPELQHHHHTTSHHHHaaaaaaxaaaa
1emu_A_1261emu   A126136LHSLLDDQDGIHHHHTTSHHHHaaaaaabaaaa
1i7n_A_2171i7n   A219229SIYNFCDKPWVHHHHTSSHHHHaaaaaabaaaa
1iap_A_491iap   A4959LEQVKRRPAHLHHHHTT-HHHHaaaaaabaaaa
1kdg_A_4831kdg   A486496IQTVQSNPTAAHHHHHTSHHHHaaaaaaxaaaa
1l0l_B_1341l0l   B148158KAVALQNPQAHHHHHTTSHHHHaaaaaabaaaa
1lm8_C_331lm8   C3343REHALTSGTIKHHHHTTSHHHHaaaaaaxaaaa
1n93_X_531n93   X5666NAVALLDQSRRHHHHTTSHHHHaaaaaaxaaaa
1nrl_A_3151nrl   A315325FQQLLLEPMLKHHHHTTSHHHHaaaaaaxaaaa
1r5y_A_1651r5y   A183193RDAFDSRKEQAHHHHHTSHHHHaaaaaabaaaa
1ro7_A_1061ro7   A106116YDFFKQLKDFNHHHHTTSHHHHaaaaaaxaaaa
1s29_A_241s29   A2434DVNVQRDIFLKHHHHTT-HHHHaaaaaaxaaaa
3fru_A_1343fru   A140150GNLWMKQPEAAHHHHTSSHHHHaaaaaabaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aui_B_391aui   B     CACALCIUM ION E - 41
1emu_A_1261emu   A     GOLGLYCEROL Q - 133
1emu_A_1261emu   A     GOLGLYCEROL D - 134
1emu_A_1261emu   A     GOLGLYCEROL I - 136
1emu_A_1261emu   A     GOLGLYCEROL S - 137
1nrl_A_3151nrl   A     SRL[2-(3,5-DI-TERT-BUTYL-4-HYDROXY-PHENYL)-1-(DIETHOXY-PHOSPHORYL)-VINYL]-PHOSPHONIC ACID DIETHLYL ESTER M - 323
1nrl_A_3151nrl   A     SRL[2-(3,5-DI-TERT-BUTYL-4-HYDROXY-PHENYL)-1-(DIETHOXY-PHOSPHORYL)-VINYL]-PHOSPHONIC ACID DIETHLYL ESTER L - 324
1nrl_A_3151nrl   A     SRL[2-(3,5-DI-TERT-BUTYL-4-HYDROXY-PHENYL)-1-(DIETHOXY-PHOSPHORYL)-VINYL]-PHOSPHONIC ACID DIETHLYL ESTER H - 327
1ro7_A_1061ro7   A     MSESELENOMETHIONINE F - 108
1s29_A_241s29   A     MSESELENOMETHIONINE V - 27
1s29_A_241s29   A     MSESELENOMETHIONINE F - 32
1s29_A_241s29   A     MSESELENOMETHIONINE L - 33
1s29_A_241s29   A     MSESELENOMETHIONINE K - 34
1s29_A_241s29   A     MSESELENOMETHIONINE G - 35
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1aui_B_391aui   B CA1CALCIUM BINDING SITE.E - 41

Clusters included in this Subclass
CLUSTER: HH.2.42
CLUSTER: HH.3.120
CLUSTER: HH.3.81
CLUSTER: HH.3.98
CLUSTER: HH.4.192
CLUSTER: HH.4.45