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Information on SUBCLASS 1.1.54
Subclass Accession number: 2078
Subclass: 1.1.54 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 2

Average sequence ID (%) : 0.0 +/- 0.0
Average RMSD (Å) : 0.600 +/- 0.000

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: hXpXX
(φψ)-conformation: aapaa
Pattern: [KT]x[AL][NR][ER][FV]x[DN][NS][AW][AQ][EN][AD][GS][KL][FM][GS][AY][MQ][FL]x[NQ]
Conservation:-0.191-1.241-0.8910.8590.509-0.191-1.9411.9091.2090.159-0.5410.859-0.8910.509-1.2410.8590.509-0.5410.5090.509-1.5910.859
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1lox_*_2141lox   -214235KLARRVRDSWQEDSLFGYQFLNHHHHHHHHHTT-HHHHHHHHHHaaaaaaaaaaaxaaaaaaaaaa
1mba_*_601mba   -6990TRLNEFVNNAANAGKMSAMLSQHHHHHHHHHTT-HHHHHHHHHHaaaaaaaaaaabaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1mba_*_601mba   *     HEMPROTOPORPHYRIN IX CONTAINING FE V - 63
1mba_*_601mba   *     HEMPROTOPORPHYRIN IX CONTAINING FE R - 66
1mba_*_601mba   *     HEMPROTOPORPHYRIN IX CONTAINING FE I - 67
1mba_*_601mba   *     HEMPROTOPORPHYRIN IX CONTAINING FE F - 68
1mba_*_601mba   *     HEMPROTOPORPHYRIN IX CONTAINING FE R - 70
1mba_*_601mba   *     HEMPROTOPORPHYRIN IX CONTAINING FE L - 71
1mba_*_601mba   *     HEMPROTOPORPHYRIN IX CONTAINING FE F - 74
1mba_*_601mba   *     HEMPROTOPORPHYRIN IX CONTAINING FE F - 91
1mba_*_601mba   *     HEMPROTOPORPHYRIN IX CONTAINING FE E - 94
1mba_*_601mba   *     HEMPROTOPORPHYRIN IX CONTAINING FE H - 95

Clusters included in this Subclass
CLUSTER: HH.2.189