Information on SUBCLASS 1.2.2 |
Subclass Accession number: 2080
Subclass: 1.2.2 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 63 Average sequence ID (%) : 11.2 +/- 13.8 Average RMSD (Å) : 0.557 +/- 0.177 Consensus geometry
|
Consensus Sequence: | XXpXX |
(φψ)-conformation: | aabaa |
Pattern: | x | x | [acfgilmvy] | x | [adegknqrst] | [dehnqrstwy] | [dehknpqrst] | x | x | x |
Conservation: | -0.280 | -1.230 | 0.591 | -1.086 | 0.833 | 1.445 | 1.411 | -0.835 | -0.579 | -0.270 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a8i_*_728 | 1a8i | - | 730 | 739 | EYYDRIPELR | HHHHH-HHHH | aaaaabaaaa |
1ash_*_52 | 1ash | - | 53 | 62 | EDVQNDPFFA | HHHHH-HHHH | aaaaaxaaaa |
1b6r_A_73 | 1b6r | A | 74 | 83 | FPIIADRLTQ | HHHHHSHHHH | aaaaaxaaaa |
1bdb_*_230 | 1bdb | - | 232 | 241 | YVFFATRGDA | HHHHH-HHHH | aaaaaxaaaa |
1bs0_A_249 | 1bs0 | A | 254 | 263 | YLLQFARHLI | HHHHH-HHHH | aaaaaxaaaa |
1c1k_A_68 | 1c1k | A | 77 | 86 | SNLVANQDAW | HHHHH-HHHH | aaaaaxaaaa |
1d2t_A_191 | 1d2t | A | 206 | 215 | ATLHTNPAFQ | HHHHT-HHHH | aaaaaxaaaa |
1dz4_A_253 | 1dz4 | A | 262 | 271 | EFLAKSPEHR | HHHHT-HHHH | aaaaabaaaa |
1e4e_A_124 | 1e4e | A | 127 | 136 | SAICMDKSLT | HHHHHSHHHH | aaaaaxaaaa |
1ea5_A_201 | 1ea5 | A | 207 | 216 | GMHILSPGSR | HHHHH-HHHH | aaaaaxaaaa |
1ehi_A_127 | 1ehi | A | 130 | 139 | HAVSFDKALT | HHHHHSHHHH | aaaaaxaaaa |
1em8_B_108 | 1em8 | B | 109 | 118 | TDLRANPTAR | HHHHH-HHHH | aaaaabaaaa |
1ew6_A_43 | 1ew6 | A | 44 | 53 | QELKSMAKFG | HHHHH-HHHH | aaaaaxaaaa |
1ewq_A_299 | 1ewq | A | 310 | 319 | EGFVREGALR | HHHHH-HHHH | aaaaaxaaaa |
1eyh_A_120 | 1eyh | A | 131 | 140 | VALLRDEDRL | HHHHH-HHHH | aaaaaxaaaa |
1ezv_A_133 | 1ezv | A | 149 | 158 | DFEDNDHPNR | HHHHH-HHHH | aaaaaxaaaa |
1ezv_F_5 | 1ezv | F | 13 | 22 | DYILKSPVLS | HHHHHSHHHH | aaaaaxaaaa |
1g2q_A_31 | 1g2q | A | 31 | 40 | LPIFRNPGLF | HHHHHSHHHH | aaaaabaaaa |
1g99_A_330 | 1g99 | A | 331 | 340 | GIGENSASIR | HHHHH-HHHH | aaaaaxaaaa |
1gwu_A_259 | 1gwu | A | 264 | 273 | RSFANSTQTF | HHHHH-HHHH | aaaaabaaaa |
1hbn_A_367 | 1hbn | A | 383 | 392 | EQYEEYPALL | HHHHH-HHHH | aaaaabaaaa |
1hh2_P_201 | 1hh2 | P | 207 | 216 | LMKLEIPEVE | HHHHH-HHHH | aaaaabaaaa |
1htj_F_307 | 1htj | F | 308 | 317 | DIIFQDLEKL | HHHHH-HHHH | aaaaabaaaa |
1htj_F_314 | 1htj | F | 315 | 324 | EKLKSRPAHL | HHHHH-HHHH | aaaaabaaaa |
1i2a_A_82 | 1i2a | A | 86 | 95 | EELGKNKRKL | HHHHH-HHHH | aaaaabaaaa |
1i2t_A_1041 | 1i2t | A | 1045 | 1054 | LLLLASEDSL | HHHHH-HHHH | aaaaabaaaa |
1ig0_A_126 | 1ig0 | A | 135 | 144 | SLHFNSPEFR | HHHHH-HHHH | aaaaabaaaa |
1inp_*_4 | 1inp | - | 20 | 29 | RACRQQETLF | HHHHHSHHHH | aaaaaxaaaa |
1iow_*_88 | 1iow | - | 91 | 100 | SALSMDKLRS | HHHHH-HHHH | aaaaaxaaaa |
1ixh_*_140 | 1ixh | - | 148 | 157 | YLAKVNEEWK | HHHHH-HHHH | aaaaabaaaa |
1j0h_A_484 | 1j0h | A | 495 | 504 | ALRKQYRSLR | HHHHH-HHHH | aaaaabaaaa |
1j8u_A_345 | 1j8u | A | 345 | 354 | AGLLSSFGEL | HHHHT-HHHH | aaaaabaaaa |
1jb0_A_344 | 1jb0 | A | 346 | 355 | EVLTTSWHAQ | HHHHH-HHHH | aaaaabaaaa |
1jdr_A_233 | 1jdr | A | 236 | 245 | YSLIQDPKYL | HHHHHSHHHH | aaaaaxaaaa |
1jdr_A_242 | 1jdr | A | 249 | 258 | KEYANDQDKF | HHHHT-HHHH | aaaaabaaaa |
1ji1_A_533 | 1ji1 | A | 543 | 552 | TIRNQYPALR | HHHHH-HHHH | aaaaabaaaa |
1ji2_A_481 | 1ji2 | A | 492 | 501 | RLRHRLASLT | HHHHH-HHHH | aaaaabaaaa |
1jqn_A_747 | 1jqn | A | 752 | 761 | AMCRDWPFFS | HHHHH-HHHH | aaaaabaaaa |
1kjq_A_105 | 1kjq | A | 108 | 117 | TKLTMNREGI | HHHHHSHHHH | aaaaabaaaa |
1ln1_A_65 | 1ln1 | A | 69 | 78 | ADIYMDSDYR | HHHHH-HHHH | aaaaaxaaaa |
1lp8_A_176 | 1lp8 | A | 176 | 185 | AEAARFRYIQ | HHHHHBHHHH | aaaaabaaaa |
1lri_A_44 | 1lri | A | 48 | 57 | KLMCASTACN | HHHHH-HHHH | aaaaaxaaaa |
1m2t_A_164 | 1m2t | A | 164 | 173 | SEAARFNPIL | HHHHHBHHHH | aaaaabaaaa |
1n81_A_62 | 1n81 | A | 64 | 73 | NYALKDRVSI | HHHHT-HHHH | aaaaaxaaaa |
1nln_A_164 | 1nln | A | 177 | 186 | FLERHSPYFR | HHHHH-HHHH | aaaaabaaaa |
1nup_A_172 | 1nup | A | 174 | 183 | GYIAESPILR | HHHHH-HHHH | aaaaabaaaa |
1o5l_A_91 | 1o5l | A | 96 | 105 | DLLMKDRELL | HHHHH-HHHH | aaaaabaaaa |
1oaf_A_206 | 1oaf | A | 209 | 218 | KALLSDPVFR | HHHHHSTTHH | aaaaaxaaaa |
1oe8_A_183 | 1oe8 | A | 191 | 200 | NLLASSPRLA | HHHHH-HHHH | aaaaabaaaa |
1ofw_A_97 | 1ofw | A | 103 | 112 | QQTKERRECA | HHHHHSHHHH | aaaaabaaaa |
1omr_A_169 | 1omr | A | 174 | 183 | EGTLANKEIL | HHHHH-HHHH | aaaaaxaaaa |
1pdu_A_474 | 1pdu | A | 490 | 499 | DHVTYNAEAQ | HHHHH-HHHH | aaaaaxaaaa |
1pmi_*_155 | 1pmi | - | 160 | 169 | KTLATVPELN | HHHHH-HHHH | aaaaabaaaa |
1q5d_A_257 | 1q5d | A | 268 | 277 | LNLLRSPEAL | HHHHH-HHHH | aaaaabaaaa |
1qho_A_387 | 1qho | A | 397 | 406 | GLRRNNAAIQ | HHHHH-HHHH | aaaaabaaaa |
1qis_A_300 | 1qis | A | 307 | 316 | ATILSNDALR | HHHHH-HHHH | aaaaabaaaa |
1qo8_A_418 | 1qo8 | A | 419 | 428 | QLYKKAKMVR | HHHHH-HHHH | aaaaabaaaa |
1qop_B_22 | 1qop | B | 33 | 42 | VSAQKDPEFQ | HHHHT-HHHH | aaaaaxaaaa |
1r7i_A_241 | 1r7i | A | 253 | 262 | AFAAVDPYRA | HHHHH-HHHH | aaaaabaaaa |
1uc8_A_80 | 1uc8 | A | 83 | 92 | IEACGDKWAT | HHHHHBHHHH | aaaaabaaaa |
1uok_*_460 | 1uok | - | 469 | 478 | ELRKNNEIVV | HHHHH-HHHH | aaaaabaaaa |
2fok_A_146 | 2fok | A | 154 | 163 | EAISSYPPAI | HHHHT-HHHH | aaaaabaaaa |
5rub_A_423 | 5rub | A | 425 | 434 | DYAREHKELA | HHHHT-HHHH | aaaaabaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1e4e_A_124 | 1e4e | A | AC3ADP BINDING SITE FOR CHAIN A | K - 133 |
1iow_*_88 | 1iow | * | ADPADP BINDING SITE. | K - 97 |
1oaf_A_206 | 1oaf | A | AC1HEM BINDING SITE FOR CHAIN A | S - 207 |
1ofw_A_97 | 1ofw | A | AC3HEC BINDING SITE FOR CHAIN A | C - 97 |
1ofw_A_97 | 1ofw | A | AC3HEC BINDING SITE FOR CHAIN A | C - 100 |
1ofw_A_97 | 1ofw | A | AC3HEC BINDING SITE FOR CHAIN A | H - 101 |
1ofw_A_97 | 1ofw | A | AC3HEC BINDING SITE FOR CHAIN A | Q - 104 |
1ofw_A_97 | 1ofw | A | AC4HEC BINDING SITE FOR CHAIN A | T - 105 |
Clusters included in this Subclass |
CLUSTER: HH.0.20 |
CLUSTER: HH.1.6 |
CLUSTER: HH.1.66 |
CLUSTER: HH.2.133 |
CLUSTER: HH.2.26 |