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Information on SUBCLASS 1.2.8
Subclass Accession number: 2086
Subclass: 1.2.8 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : - (>75 %)  1.11 (>75 %)  1.11.1 (>75 %)  1.11.1.6
GO : GO:0004096 (>75 %)  GO:0004601 (>75 %)  GO:0016684 (>75 %)  
SCOP : 56633 (>75 %)  56634 (>75 %)  56635 (>75 %)  
 Number of loops: 13

Average sequence ID (%) : 7.7 +/- 12.2
Average RMSD (Å) : 0.554 +/- 0.190

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: ppXXX
(φψ)-conformation: aabaa
Pattern: xx[aeknqrt][denqrsty]x[dekpqst]x[AFIKLTV][aknqrs]x
Conservation:-0.900-0.8470.6560.4990.5501.334-1.7681.114-0.051-0.587
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a8r_A_2021a8r   A202211LFKSSQNTRHHHHH-HHHHHaaaaxaaaaa
1acf_*_391acf   -4756GAFNNADAIRHHHH--HHHHaaaabaaaaa
1dxj_A_1411dxj   A141150LVARDAVISFHHHH-HHHHHaaaabaaaaa
1fi4_A_2141fi4   A215224TVATSELFKEHHHH-SHHHHaaaaxaaaaa
1h0o_A_1971h0o   A197206AIETMPCVKKHHHH-HHHHHaaaabaaaaa
1hyo_A_951hyo   A95104RLRDDKELRQHHHH-HHHHHaaaaxaaaaa
1j1n_A_931j1n   A96105IDQYAPHIKAHHHH-HHHHHaaaabaaaaa
1m4z_A_981m4z   A102111YRQFNPDANIHHHH-HHHHHaaaabaaaaa
1nij_A_1351nij   A138147QMNQFTIAQSHHHH-HHHHHaaaabaaaaa
1pam_A_3971pam   A397406LRKSNPAIAYHHHH-HHHHHaaaabaaaaa
1say_A_3301say   A330339ALETDDALAKHHHH-HHHHHaaaabaaaaa
3gcb_*_1683gcb   -168177YSTTASRKWNHHHHB-HHHHaaaabaaaaa
5rub_A_4235rub   A426435YAREHKELARHHHT-HHHHHaaaabaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1fi4_A_2141fi4   A     MSESELENOMETHIONINE L - 214
1fi4_A_2141fi4   A     MSESELENOMETHIONINE T - 215
1fi4_A_2141fi4   A     MSESELENOMETHIONINE V - 216
1fi4_A_2141fi4   A     MSESELENOMETHIONINE A - 217
1fi4_A_2141fi4   A     MSESELENOMETHIONINE F - 222
1fi4_A_2141fi4   A     MSESELENOMETHIONINE I - 226

Clusters included in this Subclass
CLUSTER: HH.0.23
CLUSTER: HH.1.69
CLUSTER: HH.2.35