Information on SUBCLASS 1.2.8 |
Subclass Accession number: 2086
Subclass: 1.2.8 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : - (>75 %) 1.11 (>75 %) 1.11.1 (>75 %) 1.11.1.6 GO : GO:0004096 (>75 %) GO:0004601 (>75 %) GO:0016684 (>75 %) SCOP : 56633 (>75 %) 56634 (>75 %) 56635 (>75 %) |
Number of loops: 13 Average sequence ID (%) : 7.7 +/- 12.2 Average RMSD (Å) : 0.554 +/- 0.190 Consensus geometry
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Consensus Sequence: | ppXXX |
(φψ)-conformation: | aabaa |
Pattern: | x | x | [aeknqrt] | [denqrsty] | x | [dekpqst] | x | [AFIKLTV] | [aknqrs] | x |
Conservation: | -0.900 | -0.847 | 0.656 | 0.499 | 0.550 | 1.334 | -1.768 | 1.114 | -0.051 | -0.587 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a8r_A_202 | 1a8r | A | 202 | 211 | LFKSSQNTRH | HHHH-HHHHH | aaaaxaaaaa |
1acf_*_39 | 1acf | - | 47 | 56 | GAFNNADAIR | HHHH--HHHH | aaaabaaaaa |
1dxj_A_141 | 1dxj | A | 141 | 150 | LVARDAVISF | HHHH-HHHHH | aaaabaaaaa |
1fi4_A_214 | 1fi4 | A | 215 | 224 | TVATSELFKE | HHHH-SHHHH | aaaaxaaaaa |
1h0o_A_197 | 1h0o | A | 197 | 206 | AIETMPCVKK | HHHH-HHHHH | aaaabaaaaa |
1hyo_A_95 | 1hyo | A | 95 | 104 | RLRDDKELRQ | HHHH-HHHHH | aaaaxaaaaa |
1j1n_A_93 | 1j1n | A | 96 | 105 | IDQYAPHIKA | HHHH-HHHHH | aaaabaaaaa |
1m4z_A_98 | 1m4z | A | 102 | 111 | YRQFNPDANI | HHHH-HHHHH | aaaabaaaaa |
1nij_A_135 | 1nij | A | 138 | 147 | QMNQFTIAQS | HHHH-HHHHH | aaaabaaaaa |
1pam_A_397 | 1pam | A | 397 | 406 | LRKSNPAIAY | HHHH-HHHHH | aaaabaaaaa |
1say_A_330 | 1say | A | 330 | 339 | ALETDDALAK | HHHH-HHHHH | aaaabaaaaa |
3gcb_*_168 | 3gcb | - | 168 | 177 | YSTTASRKWN | HHHHB-HHHH | aaaabaaaaa |
5rub_A_423 | 5rub | A | 426 | 435 | YAREHKELAR | HHHT-HHHHH | aaaabaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1fi4_A_214 | 1fi4 | A | MSESELENOMETHIONINE | L - 214 |
1fi4_A_214 | 1fi4 | A | MSESELENOMETHIONINE | T - 215 |
1fi4_A_214 | 1fi4 | A | MSESELENOMETHIONINE | V - 216 |
1fi4_A_214 | 1fi4 | A | MSESELENOMETHIONINE | A - 217 |
1fi4_A_214 | 1fi4 | A | MSESELENOMETHIONINE | F - 222 |
1fi4_A_214 | 1fi4 | A | MSESELENOMETHIONINE | I - 226 |
Clusters included in this Subclass |
CLUSTER: HH.0.23 |
CLUSTER: HH.1.69 |
CLUSTER: HH.2.35 |