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Information on SUBCLASS 1.2.16
Subclass Accession number: 2094
Subclass: 1.2.16 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 3.4 (>75 %)  3.4.21 (>75 %)  3.4.21.97 (>75 %)  5.3 (>50 %)  5.3.1 (>50 %)  5.3.1.1
GO : GO:0004807 (>50 %)  GO:0016853 (>50 %)  GO:0016860 (>50 %)  GO:0016861 (>50 %)  
SCOP : 50788 (>75 %)  50789 (>75 %)  50790 (>75 %)  51350 (>50 %)  51351 (>50 %)  51352 (>50 %)  
Number of loops: 7

Average sequence ID (%) : 9.5 +/- 10.7
Average RMSD (Å) : 0.614 +/- 0.186

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XXpXp
(φψ)-conformation: aabaa
Pattern: xxxx[ans][ADGNRT]x[CDHNS]x[EGKNR][gilw][ampy]x[akl][ALMY]
Conservation:-1.029-1.218-0.181-0.6731.520-0.141-0.8831.590-0.6401.556-0.8490.237-0.7640.5730.902
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dar_*_2061dar   -217231VEVAADFDENIMLKYHHHHTTT-HHHHHHHaaaaaaabaaaaaaa
1fm0_D_281fm0   D3246RQHMAAQSDRWALALHHHHHTT-HHHHHHHaaaaaaabaaaaaaa
1fs1_A_1291fs1   A129143LLKVSGVCKRWYRLAHHHHHTT-HHHHHHHaaaaaaabaaaaaaa
1iq8_A_3281iq8   A332346VDERARSHPKLYSAYHHHHHTT-HHHHHHHaaaaaaabaaaaaaa
1mba_*_601mba   -7387EFVNNAANAGKMSAMHHHHHTT-HHHHHHHaaaaaaabaaaaaaa
1qcz_A_1231qcz   A134148AQILATHDKELHQRLHHHHHTT-HHHHHHHaaaaaaabaaaaaaa
1ujk_A_271ujk   A3347FCEQLNEDFEGPPLAHHHHHTSSTTHHHHHaaaaaaabaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1mba_*_601mba   *     HEMPROTOPORPHYRIN IX CONTAINING FE V - 63
1mba_*_601mba   *     HEMPROTOPORPHYRIN IX CONTAINING FE R - 66
1mba_*_601mba   *     HEMPROTOPORPHYRIN IX CONTAINING FE I - 67
1mba_*_601mba   *     HEMPROTOPORPHYRIN IX CONTAINING FE F - 68
1mba_*_601mba   *     HEMPROTOPORPHYRIN IX CONTAINING FE R - 70
1mba_*_601mba   *     HEMPROTOPORPHYRIN IX CONTAINING FE L - 71
1mba_*_601mba   *     HEMPROTOPORPHYRIN IX CONTAINING FE F - 74
1mba_*_601mba   *     HEMPROTOPORPHYRIN IX CONTAINING FE F - 91
1mba_*_601mba   *     HEMPROTOPORPHYRIN IX CONTAINING FE E - 94
1mba_*_601mba   *     HEMPROTOPORPHYRIN IX CONTAINING FE H - 95
1qcz_A_1231qcz   A     MSESELENOMETHIONINE A - 126
1qcz_A_1231qcz   A     MSESELENOMETHIONINE A - 129
1ujk_A_271ujk   A     IODIODIDE ION R - 49
1ujk_A_271ujk   A     IODIODIDE ION L - 50
1ujk_A_271ujk   A     IODIODIDE ION L - 51
1ujk_A_271ujk   A     IODIODIDE ION H - 53
1ujk_A_271ujk   A     IODIODIDE ION K - 54

Clusters included in this Subclass
CLUSTER: HH.2.149
CLUSTER: HH.3.106
CLUSTER: HH.3.247
CLUSTER: HH.4.240
CLUSTER: HH.4.33