Information on SUBCLASS 1.2.22 |
Subclass Accession number: 2100
Subclass: 1.2.22 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 3.2 (>50 %) 3.2.1 (>50 %) SCOP : 51445 (>50 %) |
Number of loops: 5 Average sequence ID (%) : 7.3 +/- 9.5 Average RMSD (Å) : 0.580 +/- 0.239 Consensus geometry
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Consensus Sequence: | Xpppp |
(φψ)-conformation: | aabaa |
Pattern: | [KNPS] | [dknr] | x | x | [DQST] | x | [FIL] | [adn] | [EGNQS] | [dkrt] | x | [ENQTW] | [gly] | [ar] | [egqs] |
Conservation: | 1.048 | -0.412 | -1.018 | -0.743 | 1.046 | -0.470 | 2.502 | -0.205 | 0.688 | -0.798 | -0.443 | -0.082 | -0.983 | 0.724 | -0.853 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b35_B_154 | 1b35 | B | 154 | 168 | PNRVTLINETLQGRS | HHHHHHHHTSHHHHH | aaaaaaaaabaaaaa |
1hdm_B_48 | 1hdm | B | 51 | 65 | NVLSQHLNQKDTLMQ | HHHHHHHHT-HHHHH | aaaaaaaaaxaaaaa |
1jqn_A_508 | 1jqn | A | 515 | 529 | NDVMTQLLNIDWYRG | HHHHHHHHHSHHHHH | aaaaaaaaaxaaaaa |
1r5y_A_165 | 1r5y | A | 180 | 194 | KRSRDAFDSRKEQAE | HHHHHHHHTSHHHHH | aaaaaaaaabaaaaa |
1vi0_A_79 | 1vi0 | A | 88 | 102 | SKHFSLLAGDHNLAI | HHHHHHHHT-HHHHH | aaaaaaaaabaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1vi0_A_79 | 1vi0 | A | MSESELENOMETHIONINE | K - 82 |
1vi0_A_79 | 1vi0 | A | MSESELENOMETHIONINE | L - 85 |
1vi0_A_79 | 1vi0 | A | MSESELENOMETHIONINE | V - 86 |
1vi0_A_79 | 1vi0 | A | MSESELENOMETHIONINE | K - 89 |
1vi0_A_79 | 1vi0 | A | MSESELENOMETHIONINE | H - 90 |
1vi0_A_79 | 1vi0 | A | DCCDODECYL-COA | H - 90 |
1vi0_A_79 | 1vi0 | A | DCCDODECYL-COA | L - 93 |
1vi0_A_79 | 1vi0 | A | DCCDODECYL-COA | L - 94 |
1vi0_A_79 | 1vi0 | A | DCCDODECYL-COA | L - 100 |
1vi0_A_79 | 1vi0 | A | DCCDODECYL-COA | V - 103 |
1vi0_A_79 | 1vi0 | A | DCCDODECYL-COA | T - 104 |
1vi0_A_79 | 1vi0 | A | DCCDODECYL-COA | Q - 105 |
Clusters included in this Subclass |
CLUSTER: HH.1.91 |
CLUSTER: HH.2.218 |