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Information on SUBCLASS 1.2.23
Subclass Accession number: 2101
Subclass: 1.2.23 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0005489 (>75 %)  GO:0005515 (>75 %)  
SCOP : 46625 (>75 %)  46626 (>75 %)  46627 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 10.2 +/- 11.4
Average RMSD (Å) : 0.525 +/- 0.222

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XXpPX
(φψ)-conformation: aabaa
Pattern: [LPT][AILV]xxx[EFKL][AENQ][KNQY][P]x[EFMR]x[ENY]x[AFL]xxx
Conservation:-0.2420.332-0.4610.142-0.541-0.6200.015-0.0253.823-0.541-0.501-0.3460.174-0.0650.081-0.342-0.660-0.223
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dvk_A_1571dvk   A165182TVLYHLQQPKEINLAVQSHHHHHHTSGGGHHHHHHHaaaaaaabaaaaaaaaaa
1lh0_A_11841lh0   A11871204LIAYLEEKPDMAEHLAAVHHHHHHH-GGGHHHHHHHaaaaaaaxaaaaaaaaaa
1qus_A_1741qus   A178195LATLSFNYPRRAEYFSGEHHHHHHS-GGGHHHHHHHaaaaaaabaaaaaaaaaa
1vj5_A_3691vj5   A369386PLESIKANPVFDYQLYFQHHHHHHT-GGGHHHHHHHaaaaaaabaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1qus_A_1741qus   A     EDO1,2-ETHANEDIOL R - 188
1qus_A_1741qus   A     BCNBICINE Y - 191
1qus_A_1741qus   A     EDO1,2-ETHANEDIOL Y - 191
1qus_A_1741qus   A     EDO1,2-ETHANEDIOL F - 192
1vj5_A_3691vj5   A     CIUN-CYCLOHEXYL-N'-(4-IODOPHENYL)UREA F - 379
1vj5_A_3691vj5   A     CIUN-CYCLOHEXYL-N'-(4-IODOPHENYL)UREA Y - 381
1vj5_A_3691vj5   A     CIUN-CYCLOHEXYL-N'-(4-IODOPHENYL)UREA Q - 382
1vj5_A_3691vj5   A     CIUN-CYCLOHEXYL-N'-(4-IODOPHENYL)UREA F - 385

Clusters included in this Subclass
CLUSTER: HH.5.85