|
|
|
|
|
|
|
| Information on SUBCLASS 1.3.9 |
|
Subclass Accession number: 2129
Subclass: 1.3.9 
Type: HH alpha-alpha DB: ArchDB40 Image coordinates: 
 Consensus coordinates:
Conserved Annotation GO : GO:0016829 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 9.6 +/- 10.9 Average RMSD (Å) : 0.550 +/- 0.173 Consensus geometry
|
| Consensus Sequence: | pXXhX |
| (φψ)-conformation: | aalaa |
| Pattern: | [ILVY] | x | x | x | x | x | [ADET] | [IKLM] | [EGKN] | [AFM] | x | x | [HLY] | [FKV] | [ES] | x | [FIL] | [ACK] | x |
| Conservation: | 0.662 | -1.143 | -1.068 | -1.219 | -0.241 | -0.119 | -0.166 | -0.015 | -0.015 | 0.405 | -1.595 | -0.119 | 1.590 | -0.543 | 2.386 | -0.466 | 1.414 | 0.268 | -0.016 |
| Loops included in this Subclass |
| Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
| 1b4f_A_14 | 1b4f | A | 14 | 32 | VDEWLEAIKMGQYKESFAN | HHHHHHHTT-GGGHHHHHH | aaaaaaaavaaaaaaaaaa |
| 1j79_A_274 | 1j79 | A | 278 | 296 | YATVFEEMNALQHFEAFCS | HHHHHHHTT-GGGHHHHHH | aaaaaaaalaaaaaaaaaa |
| 1n1j_A_113 | 1n1j | A | 116 | 134 | ILFAMSTLGFDSYVEPLKL | HHHHHHHTT-GGGHHHHHH | aaaaaaaagaaaaaaaaaa |
| 1pq1_A_137 | 1pq1 | A | 150 | 168 | LCVESVDKEMQVLVSRIAS | HHHHHHHTT-TTHHHHHHH | aaaaaaaavaaaaaaaaaa |
| Clusters included in this Subclass |
| CLUSTER: HH.5.142 |
| For any comment or web-related incidence, send an email to the webmaster. |
|