Information on SUBCLASS 1.3.11 |
Subclass Accession number: 2131
Subclass: 1.3.11 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 4.2 (>50 %) 4.2.3 (>50 %) 4.2.3.7 GO : GO:0000287 (>50 %) GO:0016829 (>75 %) GO:0016835 (>50 %) GO:0016838 (>50 %) GO:0050467 (>50 %) SCOP : 48575 (>50 %) 48576 (>50 %) 48586 (>50 %) |
Number of loops: 4 Average sequence ID (%) : 15.4 +/- 15.4 Average RMSD (Å) : 0.350 +/- 0.058 Consensus geometry
|
Consensus Sequence: | XXXpX |
(φψ)-conformation: | aalaa |
Pattern: | x | [ADGP] | x | x | x | x | x | [EG] | x | x | [ERS] | x | [LV] |
Conservation: | -1.168 | -0.222 | -0.281 | 0.841 | -1.109 | -0.636 | -0.104 | 1.837 | -0.281 | -0.690 | 0.514 | -0.599 | 1.899 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1gzg_A_212 | 1gzg | A | 212 | 224 | GPFRDAVGSASNL | HHHHHHHT-HHHH | aaaaaaavaaaaa |
1n4q_B_220 | 1n4q | B | 227 | 239 | IASLCLMGKLEEV | HHHHHHHT-HHHH | aaaaaaavaaaaa |
1nk4_A_440 | 1nk4 | A | 462 | 474 | LDELRRNEQDRLL | HHHHHHTT-HHHH | aaaaaaavaaaaa |
1oe4_A_262 | 1oe4 | A | 267 | 279 | RGQLLELGVLSLL | HHHHHHHT-HHHH | aaaaaaavaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gzg_A_212 | 1gzg | A | LAF5-FLUOROLEVULINIC ACID | G - 212 |
1gzg_A_212 | 1gzg | A | LAF5-FLUOROLEVULINIC ACID | P - 213 |
1gzg_A_212 | 1gzg | A | LAF5-FLUOROLEVULINIC ACID | F - 214 |
1gzg_A_212 | 1gzg | A | LAF5-FLUOROLEVULINIC ACID | R - 215 |
1gzg_A_212 | 1gzg | A | LAF5-FLUOROLEVULINIC ACID | S - 220 |
1gzg_A_212 | 1gzg | A | LAF5-FLUOROLEVULINIC ACID | L - 224 |
1n4q_B_220 | 1n4q | B | MGM2-[METHYL-(5-GERANYL-4-METHYL-PENT-3-ENYL)-AMINO]-ETHYL-DIPHOSPHATE | G - 220 |
1n4q_B_220 | 1n4q | B | MGM2-[METHYL-(5-GERANYL-4-METHYL-PENT-3-ENYL)-AMINO]-ETHYL-DIPHOSPHATE | G - 221 |
1n4q_B_220 | 1n4q | B | MGM2-[METHYL-(5-GERANYL-4-METHYL-PENT-3-ENYL)-AMINO]-ETHYL-DIPHOSPHATE | S - 222 |
1n4q_B_220 | 1n4q | B | MGM2-[METHYL-(5-GERANYL-4-METHYL-PENT-3-ENYL)-AMINO]-ETHYL-DIPHOSPHATE | C - 225 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gzg_A_212 | 1gzg | A | LA2LAF BINDING SITE FOR CHAIN A | F - 214 |
Clusters included in this Subclass |
CLUSTER: HH.3.165 |