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Information on SUBCLASS 1.3.11
Subclass Accession number: 2131
Subclass: 1.3.11 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 4.2 (>50 %)  4.2.3 (>50 %)  4.2.3.7
GO : GO:0000287 (>50 %)  GO:0016829 (>75 %)  GO:0016835 (>50 %)  GO:0016838 (>50 %)  GO:0050467 (>50 %)  
SCOP : 48575 (>50 %)  48576 (>50 %)  48586 (>50 %)  
Number of loops: 4

Average sequence ID (%) : 15.4 +/- 15.4
Average RMSD (Å) : 0.350 +/- 0.058

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 90-135 rho (°): 0-45
Consensus Sequence: XXXpX
(φψ)-conformation: aalaa
Pattern: x[ADGP]xxxxx[EG]xx[ERS]x[LV]
Conservation:-1.168-0.222-0.2810.841-1.109-0.636-0.1041.837-0.281-0.6900.514-0.5991.899
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1gzg_A_2121gzg   A212224GPFRDAVGSASNLHHHHHHHT-HHHHaaaaaaavaaaaa
1n4q_B_2201n4q   B227239IASLCLMGKLEEVHHHHHHHT-HHHHaaaaaaavaaaaa
1nk4_A_4401nk4   A462474LDELRRNEQDRLLHHHHHHTT-HHHHaaaaaaavaaaaa
1oe4_A_2621oe4   A267279RGQLLELGVLSLLHHHHHHHT-HHHHaaaaaaavaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gzg_A_2121gzg   A     LAF5-FLUOROLEVULINIC ACID G - 212
1gzg_A_2121gzg   A     LAF5-FLUOROLEVULINIC ACID P - 213
1gzg_A_2121gzg   A     LAF5-FLUOROLEVULINIC ACID F - 214
1gzg_A_2121gzg   A     LAF5-FLUOROLEVULINIC ACID R - 215
1gzg_A_2121gzg   A     LAF5-FLUOROLEVULINIC ACID S - 220
1gzg_A_2121gzg   A     LAF5-FLUOROLEVULINIC ACID L - 224
1n4q_B_2201n4q   B     MGM2-[METHYL-(5-GERANYL-4-METHYL-PENT-3-ENYL)-AMINO]-ETHYL-DIPHOSPHATE G - 220
1n4q_B_2201n4q   B     MGM2-[METHYL-(5-GERANYL-4-METHYL-PENT-3-ENYL)-AMINO]-ETHYL-DIPHOSPHATE G - 221
1n4q_B_2201n4q   B     MGM2-[METHYL-(5-GERANYL-4-METHYL-PENT-3-ENYL)-AMINO]-ETHYL-DIPHOSPHATE S - 222
1n4q_B_2201n4q   B     MGM2-[METHYL-(5-GERANYL-4-METHYL-PENT-3-ENYL)-AMINO]-ETHYL-DIPHOSPHATE C - 225
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gzg_A_2121gzg   A LA2LAF BINDING SITE FOR CHAIN AF - 214

Clusters included in this Subclass
CLUSTER: HH.3.165